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Multi-parameter photon-by-photon hidden Markov modeling.
Harris PD, Narducci A, Gebhardt C, Cordes T, Weiss S, Lerner E. Harris PD, et al. Among authors: cordes t. Nat Commun. 2022 Feb 22;13(1):1000. doi: 10.1038/s41467-022-28632-x. Nat Commun. 2022. PMID: 35194038 Free PMC article.
The transcription bubble of the RNA polymerase-promoter open complex exhibits conformational heterogeneity and millisecond-scale dynamics: implications for transcription start-site selection.
Robb NC, Cordes T, Hwang LC, Gryte K, Duchi D, Craggs TD, Santoso Y, Weiss S, Ebright RH, Kapanidis AN. Robb NC, et al. Among authors: cordes t. J Mol Biol. 2013 Mar 11;425(5):875-85. doi: 10.1016/j.jmb.2012.12.015. Epub 2012 Dec 28. J Mol Biol. 2013. PMID: 23274143 Free PMC article.
Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study.
Hellenkamp B, Schmid S, Doroshenko O, Opanasyuk O, Kühnemuth R, Rezaei Adariani S, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, Gebhardt C, Götz M, Gouridis G, Gratton E, Ha T, Hao P, Hanke CA, Hartmann A, Hendrix J, Hildebrandt LL, Hirschfeld V, Hohlbein J, Hua B, Hübner CG, Kallis E, Kapanidis AN, Kim JY, Krainer G, Lamb DC, Lee NK, Lemke EA, Levesque B, Levitus M, McCann JJ, Naredi-Rainer N, Nettels D, Ngo T, Qiu R, Robb NC, Röcker C, Sanabria H, Schlierf M, Schröder T, Schuler B, Seidel H, Streit L, Thurn J, Tinnefeld P, Tyagi S, Vandenberk N, Vera AM, Weninger KR, Wünsch B, Yanez-Orozco IS, Michaelis J, Seidel CAM, Craggs TD, Hugel T. Hellenkamp B, et al. Among authors: cordes t. Nat Methods. 2018 Sep;15(9):669-676. doi: 10.1038/s41592-018-0085-0. Epub 2018 Aug 31. Nat Methods. 2018. PMID: 30171252 Free PMC article.
Publisher Correction: Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study.
Hellenkamp B, Schmid S, Doroshenko O, Opanasyuk O, Kühnemuth R, Adariani SR, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, Gebhardt C, Götz M, Gouridis G, Gratton E, Ha T, Hao P, Hanke CA, Hartmann A, Hendrix J, Hildebrandt LL, Hirschfeld V, Hohlbein J, Hua B, Hübner CG, Kallis E, Kapanidis AN, Kim JY, Krainer G, Lamb DC, Lee NK, Lemke EA, Levesque B, Levitus M, McCann JJ, Naredi-Rainer N, Nettels D, Ngo T, Qiu R, Robb NC, Röcker C, Sanabria H, Schlierf M, Schröder T, Schuler B, Seidel H, Streit L, Thurn J, Tinnefeld P, Tyagi S, Vandenberk N, Vera AM, Weninger KR, Wünsch B, Yanez-Orozco IS, Michaelis J, Seidel CAM, Craggs TD, Hugel T. Hellenkamp B, et al. Among authors: cordes t. Nat Methods. 2018 Nov;15(11):984. doi: 10.1038/s41592-018-0193-x. Nat Methods. 2018. PMID: 30327572 Free PMC article.
An integrated transport mechanism of the maltose ABC importer.
Mächtel R, Narducci A, Griffith DA, Cordes T, Orelle C. Mächtel R, et al. Among authors: cordes t. Res Microbiol. 2019 Nov-Dec;170(8):321-337. doi: 10.1016/j.resmic.2019.09.004. Epub 2019 Sep 24. Res Microbiol. 2019. PMID: 31560984 Free PMC article. Review.
FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.
Lerner E, Barth A, Hendrix J, Ambrose B, Birkedal V, Blanchard SC, Börner R, Sung Chung H, Cordes T, Craggs TD, Deniz AA, Diao J, Fei J, Gonzalez RL, Gopich IV, Ha T, Hanke CA, Haran G, Hatzakis NS, Hohng S, Hong SC, Hugel T, Ingargiola A, Joo C, Kapanidis AN, Kim HD, Laurence T, Lee NK, Lee TH, Lemke EA, Margeat E, Michaelis J, Michalet X, Myong S, Nettels D, Peulen TO, Ploetz E, Razvag Y, Robb NC, Schuler B, Soleimaninejad H, Tang C, Vafabakhsh R, Lamb DC, Seidel CA, Weiss S. Lerner E, et al. Among authors: cordes t. Elife. 2021 Mar 29;10:e60416. doi: 10.7554/eLife.60416. Elife. 2021. PMID: 33779550 Free PMC article. Review.
188 results