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Evolutionary and functional history of the Escherichia coli K1 capsule.
Arredondo-Alonso S, Blundell-Hunter G, Fu Z, Gladstone RA, Fillol-Salom A, Loraine J, Cloutman-Green E, Johnsen PJ, Samuelsen Ø, Pöntinen AK, Cléon F, Chavez-Bueno S, De la Cruz MA, Ares MA, Vongsouvath M, Chmielarczyk A, Horner C, Klein N, McNally A, Reis JN, Penadés JR, Thomson NR, Corander J, Taylor PW, McCarthy AJ. Arredondo-Alonso S, et al. Among authors: corander j. Nat Commun. 2023 Jun 15;14(1):3294. doi: 10.1038/s41467-023-39052-w. Nat Commun. 2023. PMID: 37322051 Free PMC article.
Parallel independent evolution of pathogenicity within the genus Yersinia.
Reuter S, Connor TR, Barquist L, Walker D, Feltwell T, Harris SR, Fookes M, Hall ME, Petty NK, Fuchs TM, Corander J, Dufour M, Ringwood T, Savin C, Bouchier C, Martin L, Miettinen M, Shubin M, Riehm JM, Laukkanen-Ninios R, Sihvonen LM, Siitonen A, Skurnik M, Falcão JP, Fukushima H, Scholz HC, Prentice MB, Wren BW, Parkhill J, Carniel E, Achtman M, McNally A, Thomson NR. Reuter S, et al. Among authors: corander j. Proc Natl Acad Sci U S A. 2014 May 6;111(18):6768-73. doi: 10.1073/pnas.1317161111. Epub 2014 Apr 21. Proc Natl Acad Sci U S A. 2014. PMID: 24753568 Free PMC article.
Novel R pipeline for analyzing Biolog Phenotypic MicroArray data.
Vehkala M, Shubin M, Connor TR, Thomson NR, Corander J. Vehkala M, et al. Among authors: corander j. PLoS One. 2015 Mar 18;10(3):e0118392. doi: 10.1371/journal.pone.0118392. eCollection 2015. PLoS One. 2015. PMID: 25786143 Free PMC article.
Genomic signatures of human and animal disease in the zoonotic pathogen Streptococcus suis.
Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N, Harris D, Chieu TT, Van Vinh Chau N, Campbell J, Schultsz C, Parkhill J, Bentley SD, Langford PR, Rycroft AN, Wren BW, Farrar J, Baker S, Hoa NT, Holden MT, Tucker AW, Maskell DJ; BRaDP1T Consortium. Weinert LA, et al. Among authors: corander j. Nat Commun. 2015 Mar 31;6:6740. doi: 10.1038/ncomms7740. Nat Commun. 2015. PMID: 25824154 Free PMC article.
Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations.
McNally A, Oren Y, Kelly D, Pascoe B, Dunn S, Sreecharan T, Vehkala M, Välimäki N, Prentice MB, Ashour A, Avram O, Pupko T, Dobrindt U, Literak I, Guenther S, Schaufler K, Wieler LH, Zhiyong Z, Sheppard SK, McInerney JO, Corander J. McNally A, et al. Among authors: corander j. PLoS Genet. 2016 Sep 12;12(9):e1006280. doi: 10.1371/journal.pgen.1006280. eCollection 2016 Sep. PLoS Genet. 2016. PMID: 27618184 Free PMC article.
237 results