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PANINI: Pangenome Neighbour Identification for Bacterial Populations.
Abudahab K, Prada JM, Yang Z, Bentley SD, Croucher NJ, Corander J, Aanensen DM. Abudahab K, et al. Among authors: corander j. Microb Genom. 2019 Apr;5(4):e000220. doi: 10.1099/mgen.0.000220. Epub 2018 Nov 22. Microb Genom. 2019. PMID: 30465642 Free PMC article.
Dense genomic sampling identifies highways of pneumococcal recombination.
Chewapreecha C, Harris SR, Croucher NJ, Turner C, Marttinen P, Cheng L, Pessia A, Aanensen DM, Mather AE, Page AJ, Salter SJ, Harris D, Nosten F, Goldblatt D, Corander J, Parkhill J, Turner P, Bentley SD. Chewapreecha C, et al. Among authors: corander j. Nat Genet. 2014 Mar;46(3):305-309. doi: 10.1038/ng.2895. Epub 2014 Feb 9. Nat Genet. 2014. PMID: 24509479 Free PMC article.
Cryptic ecology among host generalist Campylobacter jejuni in domestic animals.
Sheppard SK, Cheng L, Méric G, de Haan CP, Llarena AK, Marttinen P, Vidal A, Ridley A, Clifton-Hadley F, Connor TR, Strachan NJ, Forbes K, Colles FM, Jolley KA, Bentley SD, Maiden MC, Hänninen ML, Parkhill J, Hanage WP, Corander J. Sheppard SK, et al. Among authors: corander j. Mol Ecol. 2014 May;23(10):2442-51. doi: 10.1111/mec.12742. Epub 2014 Apr 25. Mol Ecol. 2014. PMID: 24689900 Free PMC article.
Two-phase importance sampling for inference about transmission trees.
Numminen E, Chewapreecha C, Sirén J, Turner C, Turner P, Bentley SD, Corander J. Numminen E, et al. Among authors: corander j. Proc Biol Sci. 2014 Nov 7;281(1794):20141324. doi: 10.1098/rspb.2014.1324. Proc Biol Sci. 2014. PMID: 25253455 Free PMC article.
Novel staphylococcal species that form part of a Staphylococcus aureus-related complex: the non-pigmented Staphylococcus argenteus sp. nov. and the non-human primate-associated Staphylococcus schweitzeri sp. nov.
Tong SYC, Schaumburg F, Ellington MJ, Corander J, Pichon B, Leendertz F, Bentley SD, Parkhill J, Holt DC, Peters G, Giffard PM. Tong SYC, et al. Among authors: corander j. Int J Syst Evol Microbiol. 2015 Jan;65(Pt 1):15-22. doi: 10.1099/ijs.0.062752-0. Epub 2014 Sep 30. Int J Syst Evol Microbiol. 2015. PMID: 25269845 Free PMC article.
Genomic signatures of human and animal disease in the zoonotic pathogen Streptococcus suis.
Weinert LA, Chaudhuri RR, Wang J, Peters SE, Corander J, Jombart T, Baig A, Howell KJ, Vehkala M, Välimäki N, Harris D, Chieu TT, Van Vinh Chau N, Campbell J, Schultsz C, Parkhill J, Bentley SD, Langford PR, Rycroft AN, Wren BW, Farrar J, Baker S, Hoa NT, Holden MT, Tucker AW, Maskell DJ; BRaDP1T Consortium. Weinert LA, et al. Among authors: corander j. Nat Commun. 2015 Mar 31;6:6740. doi: 10.1038/ncomms7740. Nat Commun. 2015. PMID: 25824154 Free PMC article.
237 results