Cooper CJ - Search Results

1

Hotspot Coevolution Is a Key Identifier of Near-Native Protein Complexes.

Mishra SK, Cooper CJ, Parks JM, Mitchell JC. Mishra SK, et al. Among authors: cooper cj. J Phys Chem B. 2021 Jun 17;125(23):6058-6067. doi: 10.1021/acs.jpcb.0c11525. Epub 2021 Jun 2. J Phys Chem B. 2021. PMID: 34077660

2

Modeling of the Passive Permeation of Mercury and Methylmercury Complexes Through a Bacterial Cytoplasmic Membrane.

Zhou J, Smith MD, Cooper CJ, Cheng X, Smith JC, Parks JM. Zhou J, et al. Among authors: cooper cj. Environ Sci Technol. 2017 Sep 19;51(18):10595-10604. doi: 10.1021/acs.est.7b02204. Epub 2017 Aug 29. Environ Sci Technol. 2017. PMID: 28806072

3

Molecular Properties That Define the Activities of Antibiotics in Escherichia coli and Pseudomonas aeruginosa.

Cooper CJ, Krishnamoorthy G, Wolloscheck D, Walker JK, Rybenkov VV, Parks JM, Zgurskaya HI. Cooper CJ, et al. ACS Infect Dis. 2018 Aug 10;4(8):1223-1234. doi: 10.1021/acsinfecdis.8b00036. Epub 2018 May 25. ACS Infect Dis. 2018. PMID: 29756762 Free PMC article.

4

Environmental Mercury Chemistry - In Silico.

Asaduzzaman A, Riccardi D, Afaneh AT, Cooper CJ, Smith JC, Wang F, Parks JM, Schreckenbach G. Asaduzzaman A, et al. Among authors: cooper cj. Acc Chem Res. 2019 Feb 19;52(2):379-388. doi: 10.1021/acs.accounts.8b00454. Epub 2019 Jan 28. Acc Chem Res. 2019. PMID: 30689347

5

Horizontal transfer of a pathway for coumarate catabolism unexpectedly inhibits purine nucleotide biosynthesis.

Close DM, Cooper CJ, Wang X, Chirania P, Gupta M, Ossyra JR, Giannone RJ, Engle N, Tschaplinski TJ, Smith JC, Hedstrom L, Parks JM, Michener JK. Close DM, et al. Among authors: cooper cj. Mol Microbiol. 2019 Dec;112(6):1784-1797. doi: 10.1111/mmi.14393. Epub 2019 Oct 1. Mol Microbiol. 2019. PMID: 31532038 Free PMC article.

6

Targeted isolation and cultivation of uncultivated bacteria by reverse genomics.

Cross KL, Campbell JH, Balachandran M, Campbell AG, Cooper CJ, Griffen A, Heaton M, Joshi S, Klingeman D, Leys E, Yang Z, Parks JM, Podar M. Cross KL, et al. Among authors: cooper cj. Nat Biotechnol. 2019 Nov;37(11):1314-1321. doi: 10.1038/s41587-019-0260-6. Epub 2019 Sep 30. Nat Biotechnol. 2019. PMID: 31570900 Free PMC article.

7

Discovery of multidrug efflux pump inhibitors with a novel chemical scaffold.

Green AT, Moniruzzaman M, Cooper CJ, Walker JK, Smith JC, Parks JM, Zgurskaya HI. Green AT, et al. Among authors: cooper cj. Biochim Biophys Acta Gen Subj. 2020 Jun;1864(6):129546. doi: 10.1016/j.bbagen.2020.129546. Epub 2020 Feb 4. Biochim Biophys Acta Gen Subj. 2020. PMID: 32032658 Free PMC article.

8

Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation.

Cooper CJ, Zheng K, Rush KW, Johs A, Sanders BC, Pavlopoulos GA, Kyrpides NC, Podar M, Ovchinnikov S, Ragsdale SW, Parks JM. Cooper CJ, et al. Commun Biol. 2020 Jun 19;3(1):320. doi: 10.1038/s42003-020-1047-5. Commun Biol. 2020. PMID: 32561885 Free PMC article.

9

Machine learning-based prediction of enzyme substrate scope: Application to bacterial nitrilases.

Mou Z, Eakes J, Cooper CJ, Foster CM, Standaert RF, Podar M, Doktycz MJ, Parks JM. Mou Z, et al. Among authors: cooper cj. Proteins. 2021 Mar;89(3):336-347. doi: 10.1002/prot.26019. Epub 2020 Nov 10. Proteins. 2021. PMID: 33118210

10

β-Barrel proteins tether the outer membrane in many Gram-negative bacteria.

Sandoz KM, Moore RA, Beare PA, Patel AV, Smith RE, Bern M, Hwang H, Cooper CJ, Priola SA, Parks JM, Gumbart JC, Mesnage S, Heinzen RA. Sandoz KM, et al. Among authors: cooper cj. Nat Microbiol. 2021 Jan;6(1):19-26. doi: 10.1038/s41564-020-00798-4. Epub 2020 Nov 2. Nat Microbiol. 2021. PMID: 33139883 Free PMC article.

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