Cooke IR - Search Results

1

Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial.

Lau SCY, Wilson NG, Golledge NR, Naish TR, Watts PC, Silva CNS, Cooke IR, Allcock AL, Mark FC, Linse K, Strugnell JM. Lau SCY, et al. Among authors: cooke ir. Science. 2023 Dec 22;382(6677):1384-1389. doi: 10.1126/science.ade0664. Epub 2023 Dec 21. Science. 2023. PMID: 38127761

2

Epipodial Tentacle Gene Expression and Predetermined Resilience to Summer Mortality in the Commercially Important Greenlip Abalone, Haliotis laevigata.

Shiel BP, Hall NE, Cooke IR, Robinson NA, Strugnell JM. Shiel BP, et al. Among authors: cooke ir. Mar Biotechnol (NY). 2017 Apr;19(2):191-205. doi: 10.1007/s10126-017-9742-z. Epub 2017 Mar 27. Mar Biotechnol (NY). 2017. PMID: 28349286 Free PMC article.

3

Coupled Genomic Evolutionary Histories as Signatures of Organismal Innovations in Cephalopods: Co-evolutionary Signatures Across Levels of Genome Organization May Shed Light on Functional Linkage and Origin of Cephalopod Novelties.

Ritschard EA, Whitelaw B, Albertin CB, Cooke IR, Strugnell JM, Simakov O. Ritschard EA, et al. Among authors: cooke ir. Bioessays. 2019 Dec;41(12):e1900073. doi: 10.1002/bies.201900073. Epub 2019 Oct 30. Bioessays. 2019. PMID: 31664724

4

The complete mitochondrial genome of the pygmy squid, Idiosepius (Cephalopoda: Decapodiformes): the first representative from the family Idiosepiidae.

Hall NE, Hanzak J, Allcock AL, Cooke IR, Ogura A, Strugnell JM. Hall NE, et al. Among authors: cooke ir. Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):5-6. doi: 10.3109/19401736.2013.865180. Epub 2014 Jan 17. Mitochondrial DNA A DNA Mapp Seq Anal. 2016. PMID: 24438246

5

Shotgun Proteomics Analysis of Saliva and Salivary Gland Tissue from the Common Octopus Octopus vulgaris.

Fingerhut LCHW, Strugnell JM, Faou P, Labiaga ÁR, Zhang J, Cooke IR. Fingerhut LCHW, et al. Among authors: cooke ir. J Proteome Res. 2018 Nov 2;17(11):3866-3876. doi: 10.1021/acs.jproteome.8b00525. Epub 2018 Sep 27. J Proteome Res. 2018. PMID: 30220204

6

Comparative Proteomic Analysis of Slime from the Striped Pyjama Squid, Sepioloidea lineolata, and the Southern Bottletail Squid, Sepiadarium austrinum (Cephalopoda: Sepiadariidae).

Caruana NJ, Strugnell JM, Faou P, Finn J, Cooke IR. Caruana NJ, et al. Among authors: cooke ir. J Proteome Res. 2019 Mar 1;18(3):890-899. doi: 10.1021/acs.jproteome.8b00569. Epub 2019 Jan 25. J Proteome Res. 2019. PMID: 30628786

7

Quantitative Proteomic Analysis of the Slime and Ventral Mantle Glands of the Striped Pyjama Squid (Sepioloidea lineolata).

Caruana NJ, Strugnell JM, Finn J, Faou P, Plummer KM, Cooke IR. Caruana NJ, et al. Among authors: cooke ir. J Proteome Res. 2020 Apr 3;19(4):1491-1501. doi: 10.1021/acs.jproteome.9b00738. Epub 2020 Mar 5. J Proteome Res. 2020. PMID: 32091901

8

ampir: an R package for fast genome-wide prediction of antimicrobial peptides.

Fingerhut LCHW, Miller DJ, Strugnell JM, Daly NL, Cooke IR. Fingerhut LCHW, et al. Among authors: cooke ir. Bioinformatics. 2021 Jan 29;36(21):5262-5263. doi: 10.1093/bioinformatics/btaa653. Bioinformatics. 2021. PMID: 32683445

9

Genomic signatures in the coral holobiont reveal host adaptations driven by Holocene climate change and reef specific symbionts.

Cooke I, Ying H, Forêt S, Bongaerts P, Strugnell JM, Simakov O, Zhang J, Field MA, Rodriguez-Lanetty M, Bell SC, Bourne DG, van Oppen MJ, Ragan MA, Miller DJ. Cooke I, et al. Sci Adv. 2020 Nov 27;6(48):eabc6318. doi: 10.1126/sciadv.abc6318. Print 2020 Nov. Sci Adv. 2020. PMID: 33246955 Free PMC article.

10

Evolutionary responses of a reef-building coral to climate change at the end of the last glacial maximum.

Zhang J, Richards ZT, Adam AAS, Chan CX, Shinzato C, Gilmour J, Thomas L, Strugnell JM, Miller DJ, Cooke I. Zhang J, et al. Mol Biol Evol. 2022 Oct 11;39(10):msac201. doi: 10.1093/molbev/msac201. Online ahead of print. Mol Biol Evol. 2022. PMID: 36219871 Free PMC article.

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