Comez D - Search Results

1

NanoB² to monitor interactions of ligands with membrane proteins by combining nanobodies and NanoBRET.

van den Bor J, Bergkamp ND, Anbuhl SM, Dekker F, Comez D, Perez Almeria CV, Bosma R, White CW, Kilpatrick LE, Hill SJ, Siderius M, Smit MJ, Heukers R. van den Bor J, et al. Among authors: comez d. Cell Rep Methods. 2023 Mar 13;3(3):100422. doi: 10.1016/j.crmeth.2023.100422. eCollection 2023 Mar 27. Cell Rep Methods. 2023. PMID: 37056381 Free PMC article.

2

Fluorescently tagged nanobodies and NanoBRET to study ligand-binding and agonist-induced conformational changes of full-length EGFR expressed in living cells.

Comez D, Glenn J, Anbuhl SM, Heukers R, Smit MJ, Hill SJ, Kilpatrick LE. Comez D, et al. Front Immunol. 2022 Nov 23;13:1006718. doi: 10.3389/fimmu.2022.1006718. eCollection 2022. Front Immunol. 2022. PMID: 36505413 Free PMC article.

3

Small Molecule Fluorescent Ligands for the Atypical Chemokine Receptor 3 (ACKR3).

Dekkers S, Comez D, Karsai N, Arimont-Segura M, Canals M, Caspar B, de Graaf C, Kilpatrick LE, Leurs R, Kellam B, Hill SJ, Briddon SJ, Stocks MJ. Dekkers S, et al. Among authors: comez d. ACS Med Chem Lett. 2023 Dec 8;15(1):143-148. doi: 10.1021/acsmedchemlett.3c00469. eCollection 2024 Jan 11. ACS Med Chem Lett. 2023. PMID: 38229752 Free PMC article.

4

c-Met activation promotes extravasation of hepatocellular carcinoma cells into 3D-cultured hepatocyte cells in lab-on-a-chip device.

Bagci G, Comez D, Topel H, Yilmaz Y, Bagirsakci E, Gunes A, Batı Ayaz G, Tahmaz I, Bilgen M, Solmaz G, Pesen Okvur D, Atabey N. Bagci G, et al. Among authors: comez d. Biochim Biophys Acta Mol Cell Res. 2023 Dec;1870(8):119557. doi: 10.1016/j.bbamcr.2023.119557. Epub 2023 Aug 5. Biochim Biophys Acta Mol Cell Res. 2023. PMID: 37549739

5

High glucose induced c-Met activation promotes aggressive phenotype and regulates expression of glucose metabolism genes in HCC cells.

Topel H, Bağırsakçı E, Yılmaz Y, Güneş A, Bağcı G, Çömez D, Kahraman E, Korhan P, Atabey N. Topel H, et al. Among authors: comez d. Sci Rep. 2021 May 31;11(1):11376. doi: 10.1038/s41598-021-89765-5. Sci Rep. 2021. PMID: 34059694 Free PMC article.

6

lncRNA HOTAIR overexpression induced downregulation of c-Met signaling promotes hybrid epithelial/mesenchymal phenotype in hepatocellular carcinoma cells.

Topel H, Bagirsakci E, Comez D, Bagci G, Cakan-Akdogan G, Atabey N. Topel H, et al. Among authors: comez d. Cell Commun Signal. 2020 Jul 11;18(1):110. doi: 10.1186/s12964-020-00602-0. Cell Commun Signal. 2020. PMID: 32650779 Free PMC article.

7

Processing multimode binding situations in simulation-based prediction of ligand-macromolecule affinities.

Khandelwal A, Lukacova V, Kroll DM, Raha S, Comez D, Balaz S. Khandelwal A, et al. Among authors: comez d. J Phys Chem A. 2005 Jul 28;109(29):6387-91. doi: 10.1021/jp051105x. J Phys Chem A. 2005. PMID: 16833982 Free PMC article.

8

A combination of docking, QM/MM methods, and MD simulation for binding affinity estimation of metalloprotein ligands.

Khandelwal A, Lukacova V, Comez D, Kroll DM, Raha S, Balaz S. Khandelwal A, et al. Among authors: comez d. J Med Chem. 2005 Aug 25;48(17):5437-47. doi: 10.1021/jm049050v. J Med Chem. 2005. PMID: 16107143 Free PMC article.

9

A comparison of the binding sites of matrix metalloproteinases and tumor necrosis factor-alpha converting enzyme: implications for selectivity.

Lukacova V, Zhang Y, Kroll DM, Raha S, Comez D, Balaz S. Lukacova V, et al. Among authors: comez d. J Med Chem. 2005 Apr 7;48(7):2361-70. doi: 10.1021/jm0491703. J Med Chem. 2005. PMID: 15801829 Free PMC article.

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