Collins CC - Search Results

1

The long noncoding RNA landscape of neuroendocrine prostate cancer and its clinical implications.

Ramnarine VR, Alshalalfa M, Mo F, Nabavi N, Erho N, Takhar M, Shukin R, Brahmbhatt S, Gawronski A, Kobelev M, Nouri M, Lin D, Tsai H, Lotan TL, Karnes RJ, Rubin MA, Zoubeidi A, Gleave ME, Sahinalp C, Wyatt AW, Volik SV, Beltran H, Davicioni E, Wang Y, Collins CC. Ramnarine VR, et al. Among authors: collins cc. Gigascience. 2018 Jun 1;7(6):giy050. doi: 10.1093/gigascience/giy050. Gigascience. 2018. PMID: 29757368 Free PMC article.

2

Reconstructing tumor genome architectures.

Raphael BJ, Volik S, Collins C, Pevzner PA. Raphael BJ, et al. Bioinformatics. 2003 Oct;19 Suppl 2:ii162-71. doi: 10.1093/bioinformatics/btg1074. Bioinformatics. 2003. PMID: 14534186

3

Preliminary evaluation of prostate cancer metastatic risk biomarkers.

Paris PL, Weinberg V, Simko J, Andaya A, Albo G, Rubin MA, Carroll PR, Collins C. Paris PL, et al. Int J Biol Markers. 2005 Jul-Sep;20(3):141-5. doi: 10.1177/172460080502000301. Int J Biol Markers. 2005. PMID: 16247872 Free article.

4

Decoding the fine-scale structure of a breast cancer genome and transcriptome.

Volik S, Raphael BJ, Huang G, Stratton MR, Bignel G, Murnane J, Brebner JH, Bajsarowicz K, Paris PL, Tao Q, Kowbel D, Lapuk A, Shagin DA, Shagina IA, Gray JW, Cheng JF, de Jong PJ, Pevzner P, Collins C. Volik S, et al. Genome Res. 2006 Mar;16(3):394-404. doi: 10.1101/gr.4247306. Epub 2006 Feb 3. Genome Res. 2006. PMID: 16461635 Free PMC article.

5

Genomic profiling of hormone-naïve lymph node metastases in patients with prostate cancer.

Paris PL, Hofer MD, Albo G, Kuefer R, Gschwend JE, Hautmann RE, Fridyland J, Simko J, Carroll PR, Rubin MA, Collins C. Paris PL, et al. Neoplasia. 2006 Dec;8(12):1083-9. doi: 10.1593/neo.06421. Neoplasia. 2006. PMID: 17217626 Free PMC article.

6

TMPRSS2-ERG fusion prostate cancer: an early molecular event associated with invasion.

Perner S, Mosquera JM, Demichelis F, Hofer MD, Paris PL, Simko J, Collins C, Bismar TA, Chinnaiyan AM, De Marzo AM, Rubin MA. Perner S, et al. Am J Surg Pathol. 2007 Jun;31(6):882-8. doi: 10.1097/01.pas.0000213424.38503.aa. Am J Surg Pathol. 2007. PMID: 17527075

7

Evaluation of paired-end sequencing strategies for detection of genome rearrangements in cancer.

Bashir A, Volik S, Collins C, Bafna V, Raphael BJ. Bashir A, et al. PLoS Comput Biol. 2008 Apr 25;4(4):e1000051. doi: 10.1371/journal.pcbi.1000051. PLoS Comput Biol. 2008. PMID: 18404202 Free PMC article.

8

An oncogenic role for the multiple endocrine neoplasia type 1 gene in prostate cancer.

Paris PL, Sridharan S, Hittelman AB, Kobayashi Y, Perner S, Huang G, Simko J, Carroll P, Rubin MA, Collins C. Paris PL, et al. Prostate Cancer Prostatic Dis. 2009;12(2):184-91. doi: 10.1038/pcan.2008.45. Epub 2008 Sep 9. Prostate Cancer Prostatic Dis. 2009. PMID: 18779856 Free PMC article.

9

Comrad: detection of expressed rearrangements by integrated analysis of RNA-Seq and low coverage genome sequence data.

McPherson A, Wu C, Hajirasouliha I, Hormozdiari F, Hach F, Lapuk A, Volik S, Shah S, Collins C, Sahinalp SC. McPherson A, et al. Bioinformatics. 2011 Jun 1;27(11):1481-8. doi: 10.1093/bioinformatics/btr184. Epub 2011 Apr 9. Bioinformatics. 2011. PMID: 21478487

10

Next-generation sequencing of prostate tumors provides independent evidence of xenotropic murine leukemia virus-related gammaretrovirus contamination.

Mo F, Wyatt AW, Wu C, Lapuk AV, Marra MA, Gleave ME, Volik SV, Collins CC. Mo F, et al. Among authors: collins cc. J Clin Microbiol. 2012 Feb;50(2):536-7. doi: 10.1128/JCM.06170-11. Epub 2011 Dec 7. J Clin Microbiol. 2012. PMID: 22162557 Free PMC article. No abstract available.

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