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Effective methods for bulk RNA-seq deconvolution using scnRNA-seq transcriptomes.
Genome Biol. 2023 Aug 1;24(1):177. doi: 10.1186/s13059-023-03016-6.
Genome Biol. 2023.
PMID: 37528411
Free PMC article.
Author Correction: Benchmarking of cell type deconvolution pipelines for transcriptomics data.
Cobos FA, Alquicira-Hernandez J, Powell JE, Mestdagh P, De Preter K.
Cobos FA, et al.
Nat Commun. 2020 Dec 2;11(1):6291. doi: 10.1038/s41467-020-20288-9.
Nat Commun. 2020.
PMID: 33268785
Free PMC article.
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Asthma inflammatory phenotypes show differential microRNA expression in sputum.
Maes T, Cobos FA, Schleich F, Sorbello V, Henket M, De Preter K, Bracke KR, Conickx G, Mesnil C, Vandesompele J, Lahousse L, Bureau F, Mestdagh P, Joos GF, Ricciardolo FL, Brusselle GG, Louis R.
Maes T, et al. Among authors: cobos fa.
J Allergy Clin Immunol. 2016 May;137(5):1433-46. doi: 10.1016/j.jaci.2016.02.018.
J Allergy Clin Immunol. 2016.
PMID: 27155035
Free article.
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A comprehensive inventory of TLX1 controlled long non-coding RNAs in T-cell acute lymphoblastic leukemia through polyA+ and total RNA sequencing.
Verboom K, Van Loocke W, Volders PJ, Decaesteker B, Cobos FA, Bornschein S, de Bock CE, Atak ZK, Clappier E, Aerts S, Cools J, Soulier J, Taghon T, Van Vlierberghe P, Vandesompele J, Speleman F, Durinck K.
Verboom K, et al. Among authors: cobos fa.
Haematologica. 2018 Dec;103(12):e585-e589. doi: 10.3324/haematol.2018.190587. Epub 2018 Jun 28.
Haematologica. 2018.
PMID: 29954933
Free PMC article.
No abstract available.
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A neuronal enhancer network upstream of MEF2C is compromised in patients with Rett-like characteristics.
D'haene E, Bar-Yaacov R, Bariah I, Vantomme L, Van Loo S, Cobos FA, Verboom K, Eshel R, Alatawna R, Menten B, Birnbaum RY, Vergult S.
D'haene E, et al. Among authors: cobos fa.
Hum Mol Genet. 2019 Mar 1;28(5):818-827. doi: 10.1093/hmg/ddy393.
Hum Mol Genet. 2019.
PMID: 30445463
Free PMC article.
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A neuronal enhancer network upstream of MEF2C is compromised in patients with Rett like characteristics.
D'haene E, Bar-Yaacov R, Bariah I, Vantomme L, Van Loo S, Cobos FA, Verboom K, Eshel R, Alatawna R, Menten B, Birnbaum RY, Vergult S.
D'haene E, et al. Among authors: cobos fa.
Hum Mol Genet. 2020 Mar 27;29(5):879-880. doi: 10.1093/hmg/ddaa019.
Hum Mol Genet. 2020.
PMID: 32031622
Free PMC article.
No abstract available.
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