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Breeding progress and preparedness for mass-scale deployment of perennial lignocellulosic biomass crops switchgrass, miscanthus, willow and poplar.
Clifton-Brown J, Harfouche A, Casler MD, Dylan Jones H, Macalpine WJ, Murphy-Bokern D, Smart LB, Adler A, Ashman C, Awty-Carroll D, Bastien C, Bopper S, Botnari V, Brancourt-Hulmel M, Chen Z, Clark LV, Cosentino S, Dalton S, Davey C, Dolstra O, Donnison I, Flavell R, Greef J, Hanley S, Hastings A, Hertzberg M, Hsu TW, Huang LS, Iurato A, Jensen E, Jin X, Jørgensen U, Kiesel A, Kim DS, Liu J, McCalmont JP, McMahon BG, Mos M, Robson P, Sacks EJ, Sandu A, Scalici G, Schwarz K, Scordia D, Shafiei R, Shield I, Slavov G, Stanton BJ, Swaminathan K, Taylor G, Torres AF, Trindade LM, Tschaplinski T, Tuskan GA, Yamada T, Yeon Yu C, Zalesny RS Jr, Zong J, Lewandowski I. Clifton-Brown J, et al. Among authors: clark lv. Glob Change Biol Bioenergy. 2019 Jan;11(1):118-151. doi: 10.1111/gcbb.12566. Epub 2018 Oct 23. Glob Change Biol Bioenergy. 2019. PMID: 30854028 Free PMC article.
Population structure of Miscanthus sacchariflorus reveals two major polyploidization events, tetraploid-mediated unidirectional introgression from diploid M. sinensis, and diversity centred around the Yellow Sea.
Clark LV, Jin X, Petersen KK, Anzoua KG, Bagmet L, Chebukin P, Deuter M, Dzyubenko E, Dzyubenko N, Heo K, Johnson DA, Jørgensen U, Kjeldsen JB, Nagano H, Peng J, Sabitov A, Yamada T, Yoo JH, Yu CY, Long SP, Sacks EJ. Clark LV, et al. Ann Bot. 2019 Oct 29;124(4):731-748. doi: 10.1093/aob/mcy161. Ann Bot. 2019. PMID: 30247525 Free PMC article.
Training Population Optimization for Genomic Selection in Miscanthus.
Olatoye MO, Clark LV, Labonte NR, Dong H, Dwiyanti MS, Anzoua KG, Brummer JE, Ghimire BK, Dzyubenko E, Dzyubenko N, Bagmet L, Sabitov A, Chebukin P, Głowacka K, Heo K, Jin X, Nagano H, Peng J, Yu CY, Yoo JH, Zhao H, Long SP, Yamada T, Sacks EJ, Lipka AE. Olatoye MO, et al. Among authors: clark lv. G3 (Bethesda). 2020 Jul 7;10(7):2465-2476. doi: 10.1534/g3.120.401402. G3 (Bethesda). 2020. PMID: 32457095 Free PMC article.
Genome biology of the paleotetraploid perennial biomass crop Miscanthus.
Mitros T, Session AM, James BT, Wu GA, Belaffif MB, Clark LV, Shu S, Dong H, Barling A, Holmes JR, Mattick JE, Bredeson JV, Liu S, Farrar K, Głowacka K, Jeżowski S, Barry K, Chae WB, Juvik JA, Gifford J, Oladeinde A, Yamada T, Grimwood J, Putnam NH, De Vega J, Barth S, Klaas M, Hodkinson T, Li L, Jin X, Peng J, Yu CY, Heo K, Yoo JH, Ghimire BK, Donnison IS, Schmutz J, Hudson ME, Sacks EJ, Moose SP, Swaminathan K, Rokhsar DS. Mitros T, et al. Among authors: clark lv. Nat Commun. 2020 Oct 28;11(1):5442. doi: 10.1038/s41467-020-18923-6. Nat Commun. 2020. PMID: 33116128 Free PMC article.
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