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The Supragingival Biofilm in Early Childhood Caries: Clinical and Laboratory Protocols and Bioinformatics Pipelines Supporting Metagenomics, Metatranscriptomics, and Metabolomics Studies of the Oral Microbiome.
Divaris K, Shungin D, Rodríguez-Cortés A, Basta PV, Roach J, Cho H, Wu D, Ferreira Zandoná AG, Ginnis J, Ramamoorthy S, Kinchen JM, Kwintkiewicz J, Butz N, Ribeiro AA, Azcarate-Peril MA. Divaris K, et al. Among authors: cho h. Methods Mol Biol. 2019;1922:525-548. doi: 10.1007/978-1-4939-9012-2_40. Methods Mol Biol. 2019. PMID: 30838598 Free PMC article.
Cohort Profile: ZOE 2.0-A Community-Based Genetic Epidemiologic Study of Early Childhood Oral Health.
Divaris K, Slade GD, Ferreira Zandona AG, Preisser JS, Ginnis J, Simancas-Pallares MA, Agler CS, Shrestha P, Karhade DS, Ribeiro AA, Cho H, Gu Y, Meyer BD, Joshi AR, Azcarate-Peril MA, Basta PV, Wu D, North KE. Divaris K, et al. Among authors: cho h. Int J Environ Res Public Health. 2020 Nov 1;17(21):8056. doi: 10.3390/ijerph17218056. Int J Environ Res Public Health. 2020. PMID: 33139633 Free PMC article.
Metabolomics Insights in Early Childhood Caries.
Heimisdottir LH, Lin BM, Cho H, Orlenko A, Ribeiro AA, Simon-Soro A, Roach J, Shungin D, Ginnis J, Simancas-Pallares MA, Spangler HD, Zandoná AGF, Wright JT, Ramamoorthy P, Moore JH, Koo H, Wu D, Divaris K. Heimisdottir LH, et al. Among authors: cho h. J Dent Res. 2021 Jun;100(6):615-622. doi: 10.1177/0022034520982963. Epub 2021 Jan 9. J Dent Res. 2021. PMID: 33423574 Free PMC article.
An Automated Machine Learning Classifier for Early Childhood Caries.
Karhade DS, Roach J, Shrestha P, Simancas-Pallares MA, Ginnis J, Burk ZJS, Ribeiro AA, Cho H, Wu D, Divaris K. Karhade DS, et al. Among authors: cho h. Pediatr Dent. 2021 May 15;43(3):191-197. Pediatr Dent. 2021. PMID: 34172112 Free PMC article.
The bacterial microbiome and metabolome in caries progression and arrest.
da Costa Rosa T, de Almeida Neves A, Azcarate-Peril MA, Divaris K, Wu D, Cho H, Moss K, Paster BJ, Chen T, B Freitas-Fernandes L, Fidalgo TKS, Tadeu Lopes R, Valente AP, R Arnold R, de Aguiar Ribeiro A. da Costa Rosa T, et al. Among authors: cho h. J Oral Microbiol. 2021 Jun 16;13(1):1886748. doi: 10.1080/20002297.2021.1886748. J Oral Microbiol. 2021. PMID: 34188775 Free PMC article.
Improved Metabolite Prediction Using Microbiome Data-Based Elastic Net Models.
Xie J, Cho H, Lin BM, Pillai M, Heimisdottir LH, Bandyopadhyay D, Zou F, Roach J, Divaris K, Wu D. Xie J, et al. Among authors: cho h. Front Cell Infect Microbiol. 2021 Oct 25;11:734416. doi: 10.3389/fcimb.2021.734416. eCollection 2021. Front Cell Infect Microbiol. 2021. PMID: 34760716 Free PMC article.
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