Chiara M - Search Results

1

CoVaCS: a consensus variant calling system.

Chiara M, Gioiosa S, Chillemi G, D'Antonio M, Flati T, Picardi E, Zambelli F, Horner DS, Pesole G, Castrignanò T. Chiara M, et al. BMC Genomics. 2018 Feb 5;19(1):120. doi: 10.1186/s12864-018-4508-1. BMC Genomics. 2018. PMID: 29402227 Free PMC article.

2

Large-scale detection and analysis of RNA editing in grape mtDNA by RNA deep-sequencing.

Picardi E, Horner DS, Chiara M, Schiavon R, Valle G, Pesole G. Picardi E, et al. Among authors: chiara m. Nucleic Acids Res. 2010 Aug;38(14):4755-67. doi: 10.1093/nar/gkq202. Epub 2010 Apr 12. Nucleic Acids Res. 2010. PMID: 20385587 Free PMC article.

3

SVM²: an improved paired-end-based tool for the detection of small genomic structural variations using high-throughput single-genome resequencing data.

Chiara M, Pesole G, Horner DS. Chiara M, et al. Nucleic Acids Res. 2012 Oct;40(18):e145. doi: 10.1093/nar/gks606. Epub 2012 Jun 25. Nucleic Acids Res. 2012. PMID: 22735696 Free PMC article.

4

De novo assembly of the transcriptome of the non-model plant Streptocarpus rexii employing a novel heuristic to recover locus-specific transcript clusters.

Chiara M, Horner DS, Spada A. Chiara M, et al. PLoS One. 2013 Dec 6;8(12):e80961. doi: 10.1371/journal.pone.0080961. eCollection 2013. PLoS One. 2013. PMID: 24324652 Free PMC article.

5

Draft Genome Sequences of Six Listeria monocytogenes Strains Isolated from Dairy Products from a Processing Plant in Southern Italy.

Chiara M, D'Erchia AM, Manzari C, Minotto A, Montagna C, Addante N, Santagada G, Latorre L, Pesole G, Horner DS, Parisi A. Chiara M, et al. Genome Announc. 2014 Apr 10;2(2):e00282-14. doi: 10.1128/genomeA.00282-14. Genome Announc. 2014. PMID: 24723720 Free PMC article.

6

Gene coexpression patterns during early development of the native Arabidopsis reproductive meristem: novel candidate developmental regulators and patterns of functional redundancy.

Mantegazza O, Gregis V, Chiara M, Selva C, Leo G, Horner DS, Kater MM. Mantegazza O, et al. Among authors: chiara m. Plant J. 2014 Sep;79(5):861-77. doi: 10.1111/tpj.12585. Epub 2014 Jul 28. Plant J. 2014. PMID: 24923650 Free article.

7

Draft genome sequence of Sphingobium sp. strain ba1, resistant to kanamycin and nickel ions.

Manzari C, Chiara M, Costanza A, Leoni C, Volpicella M, Picardi E, D'Erchia AM, Placido A, Trotta M, Horner DS, Pesole G, Ceci LR. Manzari C, et al. Among authors: chiara m. FEMS Microbiol Lett. 2014 Dec;361(1):8-9. doi: 10.1111/1574-6968.12618. Epub 2015 Jan 8. FEMS Microbiol Lett. 2014. PMID: 25288103

8

Tissue-specific mtDNA abundance from exome data and its correlation with mitochondrial transcription, mass and respiratory activity.

D'Erchia AM, Atlante A, Gadaleta G, Pavesi G, Chiara M, De Virgilio C, Manzari C, Mastropasqua F, Prazzoli GM, Picardi E, Gissi C, Horner D, Reyes A, Sbisà E, Tullo A, Pesole G. D'Erchia AM, et al. Among authors: chiara m. Mitochondrion. 2015 Jan;20:13-21. doi: 10.1016/j.mito.2014.10.005. Epub 2014 Nov 1. Mitochondrion. 2015. PMID: 25446395

9

Draft genome sequence of Acinetobacter sp. neg1 capable of degrading ochratoxin A.

Fanelli F, Chiara M, Liuzzi VC, Haidukowski M, Tristezza M, Caterina M, D'Erchia AM, Pesole G, Horner DS, Mule G. Fanelli F, et al. Among authors: chiara m. FEMS Microbiol Lett. 2015 Apr;362(7):fnv004. doi: 10.1093/femsle/fnv004. Epub 2015 Jan 18. FEMS Microbiol Lett. 2015. PMID: 25790508

10

Comparative Genomics of Listeria Sensu Lato: Genus-Wide Differences in Evolutionary Dynamics and the Progressive Gain of Complex, Potentially Pathogenicity-Related Traits through Lateral Gene Transfer.

Chiara M, Caruso M, D'Erchia AM, Manzari C, Fraccalvieri R, Goffredo E, Latorre L, Miccolupo A, Padalino I, Santagada G, Chiocco D, Pesole G, Horner DS, Parisi A. Chiara M, et al. Genome Biol Evol. 2015 Jul 15;7(8):2154-72. doi: 10.1093/gbe/evv131. Genome Biol Evol. 2015. PMID: 26185097 Free PMC article.

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