Cheng LY - Search Results

1

Single-Tube qPCR Detection and Quantitation of Hotspot Mutations Down to 0.01% Variant Allele Fraction.

Zhang K, Rodriguez L, Cheng LY, Wang M, Zhang DY. Zhang K, et al. Among authors: cheng ly. Anal Chem. 2022 Jan 18;94(2):934-943. doi: 10.1021/acs.analchem.1c03716. Epub 2021 Dec 21. Anal Chem. 2022. PMID: 34932306

2

High sensitivity sanger sequencing detection of BRAF mutations in metastatic melanoma FFPE tissue specimens.

Cheng LY, Haydu LE, Song P, Nie J, Tetzlaff MT, Kwong LN, Gershenwald JE, Davies MA, Zhang DY. Cheng LY, et al. Sci Rep. 2021 Apr 27;11(1):9043. doi: 10.1038/s41598-021-88391-5. Sci Rep. 2021. PMID: 33907234 Free PMC article.

3

Selective multiplexed enrichment for the detection and quantitation of low-fraction DNA variants via low-depth sequencing.

Song P, Chen SX, Yan YH, Pinto A, Cheng LY, Dai P, Patel AA, Zhang DY. Song P, et al. Among authors: cheng ly. Nat Biomed Eng. 2021 Jul;5(7):690-701. doi: 10.1038/s41551-021-00713-0. Epub 2021 May 3. Nat Biomed Eng. 2021. PMID: 33941896 Free PMC article.

4

Confirming putative variants at ≤ 5% allele frequency using allele enrichment and Sanger sequencing.

Yan YH, Chen SX, Cheng LY, Rodriguez AY, Tang R, Cabrera K, Zhang DY. Yan YH, et al. Among authors: cheng ly. Sci Rep. 2021 Jun 2;11(1):11640. doi: 10.1038/s41598-021-91142-1. Sci Rep. 2021. PMID: 34079006 Free PMC article.

5

Oncogene Concatenated Enriched Amplicon Nanopore Sequencing for rapid, accurate, and affordable somatic mutation detection.

Thirunavukarasu D, Cheng LY, Song P, Chen SX, Borad MJ, Kwong L, James P, Turner DJ, Zhang DY. Thirunavukarasu D, et al. Among authors: cheng ly. Genome Biol. 2021 Sep 6;22(1):227. doi: 10.1186/s13059-021-02449-1. Genome Biol. 2021. PMID: 34482832 Free PMC article.

6

Calibration-free NGS quantitation of mutations below 0.01% VAF.

Dai P, Wu LR, Chen SX, Wang MX, Cheng LY, Zhang JX, Hao P, Yao W, Zarka J, Issa GC, Kwong L, Zhang DY. Dai P, et al. Among authors: cheng ly. Nat Commun. 2021 Oct 21;12(1):6123. doi: 10.1038/s41467-021-26308-6. Nat Commun. 2021. PMID: 34675197 Free PMC article.

7

Cost-Efficient Sequence-Based Nonextensible Oligonucleotide in Real-Time PCR and High-Throughput Sequencing.

Zhang K, Song P, Dai P, Zhang JX, Wu LR, Cheng LY, Pinto A, Kwong L, Cabrera K, Wen R, Zhang DY. Zhang K, et al. Among authors: cheng ly. ACS Sens. 2022 Apr 22;7(4):1165-1174. doi: 10.1021/acssensors.2c00183. Epub 2022 Apr 13. ACS Sens. 2022. PMID: 35418222

8

Hairpin Structure Facilitates Multiplex High-Fidelity DNA Amplification in Real-Time Polymerase Chain Reaction.

Zhang K, Pinto A, Cheng LY, Song P, Dai P, Wang M, Rodriguez L, Weller C, Zhang DY. Zhang K, et al. Among authors: cheng ly. Anal Chem. 2022 Jul 12;94(27):9586-9594. doi: 10.1021/acs.analchem.2c00575. Epub 2022 Jun 24. Anal Chem. 2022. PMID: 35749270

9

Direct capture and sequencing reveal ultra-short single-stranded DNA in biofluids.

Cheng LY, Dai P, Wu LR, Patel AA, Zhang DY. Cheng LY, et al. iScience. 2022 Sep 1;25(10):105046. doi: 10.1016/j.isci.2022.105046. eCollection 2022 Oct 21. iScience. 2022. PMID: 36147958 Free PMC article.

10

Screening hydrogels for antifibrotic properties by implanting cellularly barcoded alginates in mice and a non-human primate.

Mukherjee S, Kim B, Cheng LY, Doerfert MD, Li J, Hernandez A, Liang L, Jarvis MI, Rios PD, Ghani S, Joshi I, Isa D, Ray T, Terlier T, Fell C, Song P, Miranda RN, Oberholzer J, Zhang DY, Veiseh O. Mukherjee S, et al. Among authors: cheng ly. Nat Biomed Eng. 2023 Jul;7(7):867-886. doi: 10.1038/s41551-023-01016-2. Epub 2023 Apr 27. Nat Biomed Eng. 2023. PMID: 37106151

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