Chan AP - Search Results

1

Mechanism-of-Action Classification of Antibiotics by Global Transcriptome Profiling.

O'Rourke A, Beyhan S, Choi Y, Morales P, Chan AP, Espinoza JL, Dupont CL, Meyer KJ, Spoering A, Lewis K, Nierman WC, Nelson KE. O'Rourke A, et al. Among authors: chan ap. Antimicrob Agents Chemother. 2020 Feb 21;64(3):e01207-19. doi: 10.1128/AAC.01207-19. Print 2020 Feb 21. Antimicrob Agents Chemother. 2020. PMID: 31907190 Free PMC article.

2

Predicting the functional effect of amino acid substitutions and indels.

Choi Y, Sims GE, Murphy S, Miller JR, Chan AP. Choi Y, et al. Among authors: chan ap. PLoS One. 2012;7(10):e46688. doi: 10.1371/journal.pone.0046688. Epub 2012 Oct 8. PLoS One. 2012. PMID: 23056405 Free PMC article.

3

A maize database resource that captures tissue-specific and subcellular-localized gene expression, via fluorescent tags and confocal imaging (Maize Cell Genomics Database).

Krishnakumar V, Choi Y, Beck E, Wu Q, Luo A, Sylvester A, Jackson D, Chan AP. Krishnakumar V, et al. Among authors: chan ap. Plant Cell Physiol. 2015 Jan;56(1):e12. doi: 10.1093/pcp/pcu178. Epub 2014 Nov 27. Plant Cell Physiol. 2015. PMID: 25432973

4

PROVEAN web server: a tool to predict the functional effect of amino acid substitutions and indels.

Choi Y, Chan AP. Choi Y, et al. Among authors: chan ap. Bioinformatics. 2015 Aug 15;31(16):2745-7. doi: 10.1093/bioinformatics/btv195. Epub 2015 Apr 6. Bioinformatics. 2015. PMID: 25851949 Free PMC article.

5

A novel method of consensus pan-chromosome assembly and large-scale comparative analysis reveal the highly flexible pan-genome of Acinetobacter baumannii.

Chan AP, Sutton G, DePew J, Krishnakumar R, Choi Y, Huang XZ, Beck E, Harkins DM, Kim M, Lesho EP, Nikolich MP, Fouts DE. Chan AP, et al. Genome Biol. 2015 Jul 21;16(1):143. doi: 10.1186/s13059-015-0701-6. Genome Biol. 2015. PMID: 26195261 Free PMC article.

6

Electrochemical detection of Pseudomonas in wound exudate samples from patients with chronic wounds.

Sismaet HJ, Banerjee A, McNish S, Choi Y, Torralba M, Lucas S, Chan A, Shanmugam VK, Goluch ED. Sismaet HJ, et al. Wound Repair Regen. 2016 Mar;24(2):366-72. doi: 10.1111/wrr.12414. Epub 2016 Mar 6. Wound Repair Regen. 2016. PMID: 26815644 Free PMC article.

7

HSV-1 clinical isolates with unique in vivo and in vitro phenotypes and insight into genomic differences.

Danaher RJ, Fouts DE, Chan AP, Choi Y, DePew J, McCorrison JM, Nelson KE, Wang C, Miller CS. Danaher RJ, et al. Among authors: chan ap. J Neurovirol. 2017 Apr;23(2):171-185. doi: 10.1007/s13365-016-0485-9. Epub 2016 Oct 13. J Neurovirol. 2017. PMID: 27739035

8

Dominance and Sexual Dimorphism Pervade the Salix purpurea L. Transcriptome.

Carlson CH, Choi Y, Chan AP, Serapiglia MJ, Town CD, Smart LB. Carlson CH, et al. Among authors: chan ap. Genome Biol Evol. 2017 Sep 1;9(9):2377-2394. doi: 10.1093/gbe/evx174. Genome Biol Evol. 2017. PMID: 28957462 Free PMC article.

9

Comparison of phasing strategies for whole human genomes.

Choi Y, Chan AP, Kirkness E, Telenti A, Schork NJ. Choi Y, et al. Among authors: chan ap. PLoS Genet. 2018 Apr 5;14(4):e1007308. doi: 10.1371/journal.pgen.1007308. eCollection 2018 Apr. PLoS Genet. 2018. PMID: 29621242 Free PMC article.

10

Multidrug resistant pathogens respond differently to the presence of co-pathogen, commensal, probiotic and host cells.

Chan AP, Choi Y, Brinkac LM, Krishnakumar R, DePew J, Kim M, Hinkle MK, Lesho EP, Fouts DE. Chan AP, et al. Sci Rep. 2018 Jun 5;8(1):8656. doi: 10.1038/s41598-018-26738-1. Sci Rep. 2018. PMID: 29872152 Free PMC article.

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