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An automated single-molecule FRET platform for high-content, multiwell plate screening of biomolecular conformations and dynamics.
Nat Commun. 2023 Oct 16;14(1):6511. doi: 10.1038/s41467-023-42232-3.
Nat Commun. 2023.
PMID: 37845199
Free PMC article.
Reliability and accuracy of single-molecule FRET studies for characterization of structural dynamics and distances in proteins.
Agam G, Gebhardt C, Popara M, Mächtel R, Folz J, Ambrose B, Chamachi N, Chung SY, Craggs TD, de Boer M, Grohmann D, Ha T, Hartmann A, Hendrix J, Hirschfeld V, Hübner CG, Hugel T, Kammerer D, Kang HS, Kapanidis AN, Krainer G, Kramm K, Lemke EA, Lerner E, Margeat E, Martens K, Michaelis J, Mitra J, Moya Muñoz GG, Quast RB, Robb NC, Sattler M, Schlierf M, Schneider J, Schröder T, Sefer A, Tan PS, Thurn J, Tinnefeld P, van Noort J, Weiss S, Wendler N, Zijlstra N, Barth A, Seidel CAM, Lamb DC, Cordes T.
Agam G, et al. Among authors: chamachi n.
Nat Methods. 2023 Apr;20(4):523-535. doi: 10.1038/s41592-023-01807-0. Epub 2023 Mar 27.
Nat Methods. 2023.
PMID: 36973549
Free PMC article.
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Single-molecule approaches reveal outer membrane protein biogenesis dynamics.
Svirina A, Chamachi N, Schlierf M.
Svirina A, et al. Among authors: chamachi n.
Bioessays. 2022 Dec;44(12):e2200149. doi: 10.1002/bies.202200149. Epub 2022 Oct 25.
Bioessays. 2022.
PMID: 36284497
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Chaperones Skp and SurA dynamically expand unfolded OmpX and synergistically disassemble oligomeric aggregates.
Chamachi N, Hartmann A, Ma MQ, Svirina A, Krainer G, Schlierf M.
Chamachi N, et al.
Proc Natl Acad Sci U S A. 2022 Mar 1;119(9):e2118919119. doi: 10.1073/pnas.2118919119.
Proc Natl Acad Sci U S A. 2022.
PMID: 35217619
Free PMC article.
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Temperature-Induced Misfolding in Prion Protein: Evidence of Multiple Partially Disordered States Stabilized by Non-Native Hydrogen Bonds.
Chamachi NG, Chakrabarty S.
Chamachi NG, et al.
Biochemistry. 2017 Feb 14;56(6):833-844. doi: 10.1021/acs.biochem.6b01042. Epub 2017 Feb 2.
Biochemistry. 2017.
PMID: 28102071
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Mechanism of Unfolding of Human Prion Protein.
Singh RK, Chamachi NG, Chakrabarty S, Mukherjee A.
Singh RK, et al. Among authors: chamachi ng.
J Phys Chem B. 2017 Jan 26;121(3):550-564. doi: 10.1021/acs.jpcb.6b11416. Epub 2017 Jan 13.
J Phys Chem B. 2017.
PMID: 28030950
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Replica Exchange Molecular Dynamics Study of Dimerization in Prion Protein: Multiple Modes of Interaction and Stabilization.
Chamachi NG, Chakrabarty S.
Chamachi NG, et al.
J Phys Chem B. 2016 Aug 4;120(30):7332-45. doi: 10.1021/acs.jpcb.6b03690. Epub 2016 Jul 22.
J Phys Chem B. 2016.
PMID: 27390876
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