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Stress, senescence, and specialized metabolites in bryophytes.
Kulshrestha S, Jibran R, van Klink JW, Zhou Y, Brummell DA, Albert NW, Schwinn KE, Chagné D, Landi M, Bowman JL, Davies KM. Kulshrestha S, et al. Among authors: chagne d. J Exp Bot. 2022 Jul 16;73(13):4396-4411. doi: 10.1093/jxb/erac085. J Exp Bot. 2022. PMID: 35259256 Free PMC article. Review.
A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants.
Pilkington SM, Crowhurst R, Hilario E, Nardozza S, Fraser L, Peng Y, Gunaseelan K, Simpson R, Tahir J, Deroles SC, Templeton K, Luo Z, Davy M, Cheng C, McNeilage M, Scaglione D, Liu Y, Zhang Q, Datson P, De Silva N, Gardiner SE, Bassett H, Chagné D, McCallum J, Dzierzon H, Deng C, Wang YY, Barron L, Manako K, Bowen J, Foster TM, Erridge ZA, Tiffin H, Waite CN, Davies KM, Grierson EP, Laing WA, Kirk R, Chen X, Wood M, Montefiori M, Brummell DA, Schwinn KE, Catanach A, Fullerton C, Li D, Meiyalaghan S, Nieuwenhuizen N, Read N, Prakash R, Hunter D, Zhang H, McKenzie M, Knäbel M, Harris A, Allan AC, Gleave A, Chen A, Janssen BJ, Plunkett B, Ampomah-Dwamena C, Voogd C, Leif D, Lafferty D, Souleyre EJF, Varkonyi-Gasic E, Gambi F, Hanley J, Yao JL, Cheung J, David KM, Warren B, Marsh K, Snowden KC, Lin-Wang K, Brian L, Martinez-Sanchez M, Wang M, Ileperuma N, Macnee N, Campin R, McAtee P, Drummond RSM, Espley RV, Ireland HS, Wu R, Atkinson RG, Karunairetnam S, Bulley S, Chunkath S, Hanley Z, Storey R, Thrimawithana AH, Thomson S, David C, Testolin R, Huang H, Hellens RP, Schaffer RJ. Pilkington SM, et al. Among authors: chagne d. BMC Genomics. 2018 Apr 16;19(1):257. doi: 10.1186/s12864-018-4656-3. BMC Genomics. 2018. PMID: 29661190 Free PMC article.
Two Loci, RiAF3 and RiAF4, Contribute to the Annual-Fruiting Trait in Rubus.
Jibran R, Spencer J, Fernandez G, Monfort A, Mnejja M, Dzierzon H, Tahir J, Davies K, Chagné D, Foster TM. Jibran R, et al. Among authors: chagne d. Front Plant Sci. 2019 Oct 25;10:1341. doi: 10.3389/fpls.2019.01341. eCollection 2019. Front Plant Sci. 2019. PMID: 31708950 Free PMC article.
CRISPR-Cas9 enrichment and long read sequencing for fine mapping in plants.
López-Girona E, Davy MW, Albert NW, Hilario E, Smart MEM, Kirk C, Thomson SJ, Chagné D. López-Girona E, et al. Among authors: chagne d. Plant Methods. 2020 Sep 1;16:121. doi: 10.1186/s13007-020-00661-x. eCollection 2020. Plant Methods. 2020. PMID: 32884578 Free PMC article.
A chromosome-scale assembly of the bilberry genome identifies a complex locus controlling berry anthocyanin composition.
Wu C, Deng C, Hilario E, Albert NW, Lafferty D, Grierson ERP, Plunkett BJ, Elborough C, Saei A, Günther CS, Ireland H, Yocca A, Edger PP, Jaakola L, Karppinen K, Grande A, Kylli R, Lehtola VP, Allan AC, Espley RV, Chagné D. Wu C, et al. Among authors: chagne d. Mol Ecol Resour. 2022 Jan;22(1):345-360. doi: 10.1111/1755-0998.13467. Epub 2021 Aug 4. Mol Ecol Resour. 2022. PMID: 34260155
Evolution and function of red pigmentation in land plants.
Davies KM, Landi M, van Klink JW, Schwinn KE, Brummell DA, Albert NW, Chagné D, Jibran R, Kulshrestha S, Zhou Y, Bowman JL. Davies KM, et al. Among authors: chagne d. Ann Bot. 2022 Nov 17;130(5):613-636. doi: 10.1093/aob/mcac109. Ann Bot. 2022. PMID: 36070407 Free PMC article. Review.
92 results