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Visualizing hierarchies in scRNA-seq data using a density tree-biased autoencoder.
Bioinformatics. 2022 Jun 24;38(Suppl 1):i316-i324. doi: 10.1093/bioinformatics/btac249.
Bioinformatics. 2022.
PMID: 35758814
Free PMC article.
Exhausted CD8+ T cells exhibit low and strongly inhibited TCR signaling during chronic LCMV infection.
Sandu I, Cerletti D, Claassen M, Oxenius A.
Sandu I, et al. Among authors: cerletti d.
Nat Commun. 2020 Sep 8;11(1):4454. doi: 10.1038/s41467-020-18256-4.
Nat Commun. 2020.
PMID: 32901001
Free PMC article.
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Landscape of Exhausted Virus-Specific CD8 T Cells in Chronic LCMV Infection.
Sandu I, Cerletti D, Oetiker N, Borsa M, Wagen F, Spadafora I, Welten SPM, Stolz U, Oxenius A, Claassen M.
Sandu I, et al. Among authors: cerletti d.
Cell Rep. 2020 Aug 25;32(8):108078. doi: 10.1016/j.celrep.2020.108078.
Cell Rep. 2020.
PMID: 32846135
Free article.
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The type IV pilin PilA couples surface attachment and cell-cycle initiation in Caulobacter crescentus.
Del Medico L, Cerletti D, Schächle P, Christen M, Christen B.
Del Medico L, et al. Among authors: cerletti d.
Proc Natl Acad Sci U S A. 2020 Apr 28;117(17):9546-9553. doi: 10.1073/pnas.1920143117. Epub 2020 Apr 15.
Proc Natl Acad Sci U S A. 2020.
PMID: 32295877
Free PMC article.
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Quantitative Selection Analysis of Bacteriophage φCbK Susceptibility in Caulobacter crescentus.
Christen M, Beusch C, Bösch Y, Cerletti D, Flores-Tinoco CE, Del Medico L, Tschan F, Christen B.
Christen M, et al. Among authors: cerletti d.
J Mol Biol. 2016 Jan 29;428(2 Pt B):419-30. doi: 10.1016/j.jmb.2015.11.018. Epub 2015 Nov 22.
J Mol Biol. 2016.
PMID: 26593064
Free article.
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Simulation-based inference of differentiation trajectories from RNA velocity fields.
Gupta R, Cerletti D, Gut G, Oxenius A, Claassen M.
Gupta R, et al. Among authors: cerletti d.
Cell Rep Methods. 2022 Dec 19;2(12):100359. doi: 10.1016/j.crmeth.2022.100359. eCollection 2022 Dec 19.
Cell Rep Methods. 2022.
PMID: 36590685
Free PMC article.
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