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Symbiosis genes show a unique pattern of introgression and selection within a Rhizobium leguminosarum species complex.
Microb Genom. 2020 Apr;6(4):e000351. doi: 10.1099/mgen.0.000351. Epub 2020 Mar 16.
Microb Genom. 2020.
PMID: 32176601
Free PMC article.
Defining the Rhizobium leguminosarum Species Complex.
Young JPW, Moeskjær S, Afonin A, Rahi P, Maluk M, James EK, Cavassim MIA, Rashid MH, Aserse AA, Perry BJ, Wang ET, Velázquez E, Andronov EE, Tampakaki A, Flores Félix JD, Rivas González R, Youseif SH, Lepetit M, Boivin S, Jorrin B, Kenicer GJ, Peix Á, Hynes MF, Ramírez-Bahena MH, Gulati A, Tian CF.
Young JPW, et al. Among authors: cavassim mia.
Genes (Basel). 2021 Jan 18;12(1):111. doi: 10.3390/genes12010111.
Genes (Basel). 2021.
PMID: 33477547
Free PMC article.
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Recombination Facilitates Adaptive Evolution in Rhizobial Soil Bacteria.
Cavassim MIA, Andersen SU, Bataillon T, Schierup MH.
Cavassim MIA, et al.
Mol Biol Evol. 2021 Dec 9;38(12):5480-5490. doi: 10.1093/molbev/msab247.
Mol Biol Evol. 2021.
PMID: 34410427
Free PMC article.
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PRDM9 losses in vertebrates are coupled to those of paralogs ZCWPW1 and ZCWPW2.
Cavassim MIA, Baker Z, Hoge C, Schierup MH, Schumer M, Przeworski M.
Cavassim MIA, et al.
Proc Natl Acad Sci U S A. 2022 Mar 1;119(9):e2114401119. doi: 10.1073/pnas.2114401119.
Proc Natl Acad Sci U S A. 2022.
PMID: 35217607
Free PMC article.
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Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations.
Lauterbur ME, Cavassim MIA, Gladstein AL, Gower G, Pope NS, Tsambos G, Adrion J, Belsare S, Biddanda A, Caudill V, Cury J, Echevarria I, Haller BC, Hasan AR, Huang X, Iasi LNM, Noskova E, Obsteter J, Pavinato VAC, Pearson A, Peede D, Perez MF, Rodrigues MF, Smith CCR, Spence JP, Teterina A, Tittes S, Unneberg P, Vazquez JM, Waples RK, Wohns AW, Wong Y, Baumdicker F, Cartwright RA, Gorjanc G, Gutenkunst RN, Kelleher J, Kern AD, Ragsdale AP, Ralph PL, Schrider DR, Gronau I.
Lauterbur ME, et al. Among authors: cavassim mia.
Elife. 2023 Jun 21;12:RP84874. doi: 10.7554/eLife.84874.
Elife. 2023.
PMID: 37342968
Free PMC article.
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Quantifying the fraction of new mutations that are recessive lethal.
Wade EE, Kyriazis CC, Cavassim MIA, Lohmueller KE.
Wade EE, et al. Among authors: cavassim mia.
Evolution. 2023 Jun 29;77(7):1539-1549. doi: 10.1093/evolut/qpad061.
Evolution. 2023.
PMID: 37074880
Free PMC article.
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Extraordinary selection on the human X chromosome associated with archaic admixture.
Skov L, Coll Macià M, Lucotte EA, Cavassim MIA, Castellano D, Schierup MH, Munch K.
Skov L, et al. Among authors: cavassim mia.
Cell Genom. 2023 Feb 28;3(3):100274. doi: 10.1016/j.xgen.2023.100274. eCollection 2023 Mar 8.
Cell Genom. 2023.
PMID: 36950386
Free PMC article.
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