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Protein-retention expansion microscopy of cells and tissues labeled using standard fluorescent proteins and antibodies.
Tillberg PW, Chen F, Piatkevich KD, Zhao Y, Yu CC, English BP, Gao L, Martorell A, Suk HJ, Yoshida F, DeGennaro EM, Roossien DH, Gong G, Seneviratne U, Tannenbaum SR, Desimone R, Cai D, Boyden ES. Tillberg PW, et al. Among authors: cai d. Nat Biotechnol. 2016 Sep;34(9):987-92. doi: 10.1038/nbt.3625. Epub 2016 Jul 4. Nat Biotechnol. 2016. PMID: 27376584 Free PMC article.
Improved tools for the Brainbow toolbox.
Cai D, Cohen KB, Luo T, Lichtman JW, Sanes JR. Cai D, et al. Nat Methods. 2013 Jun;10(6):540-7. Nat Methods. 2013. PMID: 23866336
Iterative expansion microscopy.
Chang JB, Chen F, Yoon YG, Jung EE, Babcock H, Kang JS, Asano S, Suk HJ, Pak N, Tillberg PW, Wassie AT, Cai D, Boyden ES. Chang JB, et al. Among authors: cai d. Nat Methods. 2017 Jun;14(6):593-599. doi: 10.1038/nmeth.4261. Epub 2017 Apr 17. Nat Methods. 2017. PMID: 28417997 Free PMC article.
Imaging Neural Architecture in Brainbow Samples.
Roossien DH, Cai D. Roossien DH, et al. Among authors: cai d. Methods Mol Biol. 2017;1642:211-228. doi: 10.1007/978-1-4939-7169-5_14. Methods Mol Biol. 2017. PMID: 28815503
Multispectral tracing in densely labeled mouse brain with nTracer.
Roossien DH, Sadis BV, Yan Y, Webb JM, Min LY, Dizaji AS, Bogart LJ, Mazuski C, Huth RS, Stecher JS, Akula S, Shen F, Li Y, Xiao T, Vandenbrink M, Lichtman JW, Hensch TK, Herzog ED, Cai D. Roossien DH, et al. Among authors: cai d. Bioinformatics. 2019 Sep 15;35(18):3544-3546. doi: 10.1093/bioinformatics/btz084. Bioinformatics. 2019. PMID: 30715234 Free PMC article.
nGauge: Integrated and Extensible Neuron Morphology Analysis in Python.
Walker LA, Williams JS, Li Y, Roossien DH, Lee WJ, Michki NS, Cai D. Walker LA, et al. Among authors: cai d. Neuroinformatics. 2022 Jul;20(3):755-764. doi: 10.1007/s12021-022-09573-8. Epub 2022 Mar 5. Neuroinformatics. 2022. PMID: 35247136 Free PMC article.
3,021 results