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2020 2
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2023 2
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Page 1
Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs.
Mihalič F, Simonetti L, Giudice G, Sander MR, Lindqvist R, Peters MBA, Benz C, Kassa E, Badgujar D, Inturi R, Ali M, Krystkowiak I, Sayadi A, Andersson E, Aronsson H, Söderberg O, Dobritzsch D, Petsalaki E, Överby AK, Jemth P, Davey NE, Ivarsson Y. Mihalič F, et al. Nat Commun. 2023 Apr 26;14(1):2409. doi: 10.1038/s41467-023-38015-5. Nat Commun. 2023. PMID: 37100772 Free PMC article.
ProP-PD for proteome-wide motif-mediated interaction discovery.
Davey NE, Simonetti L, Ivarsson Y. Davey NE, et al. Trends Biochem Sci. 2022 Jun;47(6):547-548. doi: 10.1016/j.tibs.2022.01.005. Epub 2022 Feb 12. Trends Biochem Sci. 2022. PMID: 35168834 Free article. No abstract available.
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation.
Quaglia F, Mészáros B, Salladini E, Hatos A, Pancsa R, Chemes LB, Pajkos M, Lazar T, Peña-Díaz S, Santos J, Ács V, Farahi N, Fichó E, Aspromonte MC, Bassot C, Chasapi A, Davey NE, Davidović R, Dobson L, Elofsson A, Erdős G, Gaudet P, Giglio M, Glavina J, Iserte J, Iglesias V, Kálmán Z, Lambrughi M, Leonardi E, Longhi S, Macedo-Ribeiro S, Maiani E, Marchetti J, Marino-Buslje C, Mészáros A, Monzon AM, Minervini G, Nadendla S, Nilsson JF, Novotný M, Ouzounis CA, Palopoli N, Papaleo E, Pereira PJB, Pozzati G, Promponas VJ, Pujols J, Rocha ACS, Salas M, Sawicki LR, Schad E, Shenoy A, Szaniszló T, Tsirigos KD, Veljkovic N, Parisi G, Ventura S, Dosztányi Z, Tompa P, Tosatto SCE, Piovesan D. Quaglia F, et al. Nucleic Acids Res. 2022 Jan 7;50(D1):D480-D487. doi: 10.1093/nar/gkab1082. Nucleic Acids Res. 2022. PMID: 34850135 Free PMC article.
The Eukaryotic Linear Motif resource: 2022 release.
Kumar M, Michael S, Alvarado-Valverde J, Mészáros B, Sámano-Sánchez H, Zeke A, Dobson L, Lazar T, Örd M, Nagpal A, Farahi N, Käser M, Kraleti R, Davey NE, Pancsa R, Chemes LB, Gibson TJ. Kumar M, et al. Nucleic Acids Res. 2022 Jan 7;50(D1):D497-D508. doi: 10.1093/nar/gkab975. Nucleic Acids Res. 2022. PMID: 34718738 Free PMC article.
MobiDB: intrinsically disordered proteins in 2021.
Piovesan D, Necci M, Escobedo N, Monzon AM, Hatos A, Mičetić I, Quaglia F, Paladin L, Ramasamy P, Dosztányi Z, Vranken WF, Davey NE, Parisi G, Fuxreiter M, Tosatto SCE. Piovesan D, et al. Nucleic Acids Res. 2021 Jan 8;49(D1):D361-D367. doi: 10.1093/nar/gkaa1058. Nucleic Acids Res. 2021. PMID: 33237329 Free PMC article.