Busi SB - Search Results

1

Functional meta-omics provide critical insights into long- and short-read assemblies.

Galata V, Busi SB, Kunath BJ, de Nies L, Calusinska M, Halder R, May P, Wilmes P, Laczny CC. Galata V, et al. Among authors: busi sb. Brief Bioinform. 2021 Nov 5;22(6):bbab330. doi: 10.1093/bib/bbab330. Brief Bioinform. 2021. PMID: 34453168 Free PMC article.

2

Optimised biomolecular extraction for metagenomic analysis of microbial biofilms from high-mountain streams.

Busi SB, Pramateftaki P, Brandani J, Fodelianakis S, Peter H, Halder R, Wilmes P, Battin TJ. Busi SB, et al. PeerJ. 2020 Oct 27;8:e9973. doi: 10.7717/peerj.9973. eCollection 2020. PeerJ. 2020. PMID: 33194372 Free PMC article.

3

Patterns and Drivers of Extracellular Enzyme Activity in New Zealand Glacier-Fed Streams.

Kohler TJ, Peter H, Fodelianakis S, Pramateftaki P, Styllas M, Tolosano M, de Staercke V, Schön M, Busi SB, Wilmes P, Washburne A, Battin TJ. Kohler TJ, et al. Among authors: busi sb. Front Microbiol. 2020 Nov 19;11:591465. doi: 10.3389/fmicb.2020.591465. eCollection 2020. Front Microbiol. 2020. PMID: 33329472 Free PMC article.

4

PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data.

de Nies L, Lopes S, Busi SB, Galata V, Heintz-Buschart A, Laczny CC, May P, Wilmes P. de Nies L, et al. Among authors: busi sb. Microbiome. 2021 Feb 17;9(1):49. doi: 10.1186/s40168-020-00993-9. Microbiome. 2021. PMID: 33597026 Free PMC article.

5

Challenges, Strategies, and Perspectives for Reference-Independent Longitudinal Multi-Omic Microbiome Studies.

Martínez Arbas S, Busi SB, Queirós P, de Nies L, Herold M, May P, Wilmes P, Muller EEL, Narayanasamy S. Martínez Arbas S, et al. Among authors: busi sb. Front Genet. 2021 Jun 14;12:666244. doi: 10.3389/fgene.2021.666244. eCollection 2021. Front Genet. 2021. PMID: 34194470 Free PMC article.

6

Microdiversity characterizes prevalent phylogenetic clades in the glacier-fed stream microbiome.

Fodelianakis S, Washburne AD, Bourquin M, Pramateftaki P, Kohler TJ, Styllas M, Tolosano M, De Staercke V, Schön M, Busi SB, Brandani J, Wilmes P, Peter H, Battin TJ. Fodelianakis S, et al. Among authors: busi sb. ISME J. 2022 Mar;16(3):666-675. doi: 10.1038/s41396-021-01106-6. Epub 2021 Sep 15. ISME J. 2022. PMID: 34522009 Free PMC article.

7

Systematic characterization of human gut microbiome-secreted molecules by integrated multi-omics.

De Saedeleer B, Malabirade A, Ramiro-Garcia J, Habier J, Trezzi JP, Peters SL, Daujeumont A, Halder R, Jäger C, Busi SB, May P, Oertel W, Mollenhauer B, Laczny CC, Hettich RL, Wilmes P. De Saedeleer B, et al. Among authors: busi sb. ISME Commun. 2021 Dec 21;1:82. doi: 10.1038/s43705-021-00078-0. eCollection 2021 Dec 21. ISME Commun. 2021. PMID: 35106519 Free PMC article.

8

Glacier shrinkage will accelerate downstream decomposition of organic matter and alters microbiome structure and function.

Kohler TJ, Fodelianakis S, Michoud G, Ezzat L, Bourquin M, Peter H, Busi SB, Pramateftaki P, Deluigi N, Styllas M, Tolosano M, de Staercke V, Schön M, Brandani J, Marasco R, Daffonchio D, Wilmes P, Battin TJ. Kohler TJ, et al. Among authors: busi sb. Glob Chang Biol. 2022 Jun;28(12):3846-3859. doi: 10.1111/gcb.16169. Epub 2022 Apr 1. Glob Chang Biol. 2022. PMID: 35320603 Free PMC article.

9

Genomic and metabolic adaptations of biofilms to ecological windows of opportunity in glacier-fed streams.

Busi SB, Bourquin M, Fodelianakis S, Michoud G, Kohler TJ, Peter H, Pramateftaki P, Styllas M, Tolosano M, De Staercke V, Schön M, de Nies L, Marasco R, Daffonchio D, Ezzat L, Wilmes P, Battin TJ. Busi SB, et al. Nat Commun. 2022 Apr 20;13(1):2168. doi: 10.1038/s41467-022-29914-0. Nat Commun. 2022. PMID: 35444202 Free PMC article.

10

Evolution of the murine gut resistome following broad-spectrum antibiotic treatment.

de Nies L, Busi SB, Tsenkova M, Halder R, Letellier E, Wilmes P. de Nies L, et al. Among authors: busi sb. Nat Commun. 2022 Apr 28;13(1):2296. doi: 10.1038/s41467-022-29919-9. Nat Commun. 2022. PMID: 35484157 Free PMC article.

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