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iCn3D: From Web-Based 3D Viewer to Structural Analysis Tool in Batch Mode.
Wang J, Youkharibache P, Marchler-Bauer A, Lanczycki C, Zhang D, Lu S, Madej T, Marchler GH, Cheng T, Chong LC, Zhao S, Yang K, Lin J, Cheng Z, Dunn R, Malkaram SA, Tai CH, Enoma D, Busby B, Johnson NL, Tabaro F, Song G, Ge Y. Wang J, et al. Among authors: busby b. Front Mol Biosci. 2022 Feb 17;9:831740. doi: 10.3389/fmolb.2022.831740. eCollection 2022. Front Mol Biosci. 2022. PMID: 35252351 Free PMC article.
Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa).
Ohdera A, Ames CL, Dikow RB, Kayal E, Chiodin M, Busby B, La S, Pirro S, Collins AG, Medina M, Ryan JF. Ohdera A, et al. Among authors: busby b. Gigascience. 2019 Jul 1;8(7):giz069. doi: 10.1093/gigascience/giz069. Gigascience. 2019. PMID: 31257419 Free PMC article.
The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
Walker K, Kalra D, Lowdon R, Chen G, Molik D, Soto DC, Dabbaghie F, Khleifat AA, Mahmoud M, Paulin LF, Raza MS, Pfeifer SP, Agustinho DP, Aliyev E, Avdeyev P, Barrozo ER, Behera S, Billingsley K, Chong LC, Choubey D, De Coster W, Fu Y, Gener AR, Hefferon T, Henke DM, Höps W, Illarionova A, Jochum MD, Jose M, Kesharwani RK, Kolora SRR, Kubica J, Lakra P, Lattimer D, Liew CS, Lo BW, Lo C, Lötter A, Majidian S, Mendem SK, Mondal R, Ohmiya H, Parvin N, Peralta C, Poon CL, Prabhakaran R, Saitou M, Sammi A, Sanio P, Sapoval N, Syed N, Treangen T, Wang G, Xu T, Yang J, Zhang S, Zhou W, Sedlazeck FJ, Busby B. Walker K, et al. Among authors: busby b. F1000Res. 2022 May 16;11:530. doi: 10.12688/f1000research.110194.1. eCollection 2022. F1000Res. 2022. PMID: 36262335 Free PMC article.
Viewing RNA-seq data on the entire human genome.
Weitz EM, Pantano L, Zhu J, Upton B, Busby B. Weitz EM, et al. Among authors: busby b. F1000Res. 2017 Apr 28;6:596. doi: 10.12688/f1000research.9762.1. eCollection 2017. F1000Res. 2017. PMID: 28979763 Free PMC article.
SeqAcademy: an educational pipeline for RNA-Seq and ChIP-Seq analysis.
Ather SH, Awe OI, Butler TJ, Denka T, Semick SA, Tang W, Busby B. Ather SH, et al. Among authors: busby b. F1000Res. 2018 May 22;7:ISCB Comm J-628. doi: 10.12688/f1000research.14880.4. eCollection 2018. F1000Res. 2018. PMID: 33014338 Free PMC article.
91 results