Burdukiewicz M - Search Results

1

CancerGram: An Effective Classifier for Differentiating Anticancer from Antimicrobial Peptides.

Burdukiewicz M, Sidorczuk K, Rafacz D, Pietluch F, Bąkała M, Słowik J, Gagat P. Burdukiewicz M, et al. Pharmaceutics. 2020 Oct 31;12(11):1045. doi: 10.3390/pharmaceutics12111045. Pharmaceutics. 2020. PMID: 33142753 Free PMC article.

2

Prediction of Signal Peptides in Proteins from Malaria Parasites.

Burdukiewicz M, Sobczyk P, Chilimoniuk J, Gagat P, Mackiewicz P. Burdukiewicz M, et al. Int J Mol Sci. 2018 Nov 22;19(12):3709. doi: 10.3390/ijms19123709. Int J Mol Sci. 2018. PMID: 30469512 Free PMC article.

3

Proteomic Screening for Prediction and Design of Antimicrobial Peptides with AmpGram.

Burdukiewicz M, Sidorczuk K, Rafacz D, Pietluch F, Chilimoniuk J, Rödiger S, Gagat P. Burdukiewicz M, et al. Int J Mol Sci. 2020 Jun 17;21(12):4310. doi: 10.3390/ijms21124310. Int J Mol Sci. 2020. PMID: 32560350 Free PMC article.

4

countfitteR: efficient selection of count distributions to assess DNA damage.

Chilimoniuk J, Gosiewska A, Słowik J, Weiss R, Deckert PM, Rödiger S, Burdukiewicz M. Chilimoniuk J, et al. Among authors: burdukiewicz m. Ann Transl Med. 2021 Apr;9(7):528. doi: 10.21037/atm-20-6363. Ann Transl Med. 2021. PMID: 33987226 Free PMC article.

5

Genome placement of alpha-haemolysin cluster is associated with alpha-haemolysin sequence variation, adhesin and iron acquisition factor profile of Escherichia coli.

Kolenda R, Sidorczuk K, Noszka M, Aleksandrowicz A, Khan MM, Burdukiewicz M, Pickard D, Schierack P. Kolenda R, et al. Among authors: burdukiewicz m. Microb Genom. 2021 Dec;7(12):000743. doi: 10.1099/mgen.0.000743. Microb Genom. 2021. PMID: 34939560 Free PMC article.

6

Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data.

Sidorczuk K, Gagat P, Pietluch F, Kała J, Rafacz D, Bąkała L, Słowik J, Kolenda R, Rödiger S, Fingerhut LCHW, Cooke IR, Mackiewicz P, Burdukiewicz M. Sidorczuk K, et al. Among authors: burdukiewicz m. Brief Bioinform. 2022 Sep 20;23(5):bbac343. doi: 10.1093/bib/bbac343. Brief Bioinform. 2022. PMID: 35988923 Free PMC article.

7

AmyloGraph: a comprehensive database of amyloid-amyloid interactions.

Burdukiewicz M, Rafacz D, Barbach A, Hubicka K, Bąkała L, Lassota A, Stecko J, Szymańska N, Wojciechowski JW, Kozakiewicz D, Szulc N, Chilimoniuk J, Jęśkowiak I, Gąsior-Głogowska M, Kotulska M. Burdukiewicz M, et al. Nucleic Acids Res. 2023 Jan 6;51(D1):D352-D357. doi: 10.1093/nar/gkac882. Nucleic Acids Res. 2023. PMID: 36243982 Free PMC article.

8

The dynamic landscape of peptide activity prediction.

Bárcenas O, Pintado-Grima C, Sidorczuk K, Teufel F, Nielsen H, Ventura S, Burdukiewicz M. Bárcenas O, et al. Among authors: burdukiewicz m. Comput Struct Biotechnol J. 2022 Nov 24;20:6526-6533. doi: 10.1016/j.csbj.2022.11.043. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 36467580 Free PMC article. Review.

9

Testing Antimicrobial Properties of Selected Short Amyloids.

Gagat P, Duda-Madej A, Ostrówka M, Pietluch F, Seniuk A, Mackiewicz P, Burdukiewicz M. Gagat P, et al. Among authors: burdukiewicz m. Int J Mol Sci. 2023 Jan 2;24(1):804. doi: 10.3390/ijms24010804. Int J Mol Sci. 2023. PMID: 36614244 Free PMC article.

10

Genomic characterization of enterohaemolysin-encoding haemolytic Escherichia coli of animal and human origin.

Sidorczuk K, Aleksandrowicz A, Burdukiewicz M, Kingsley RA, Kolenda R. Sidorczuk K, et al. Among authors: burdukiewicz m. Microb Genom. 2023 Apr;9(4):mgen000999. doi: 10.1099/mgen.0.000999. Microb Genom. 2023. PMID: 37103985 Free PMC article.

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