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Petri net-based model of the human DNA base excision repair pathway.
Radom M, Machnicka MA, Krwawicz J, Bujnicki JM, Formanowicz P. Radom M, et al. Among authors: bujnicki jm. PLoS One. 2019 Sep 13;14(9):e0217913. doi: 10.1371/journal.pone.0217913. eCollection 2019. PLoS One. 2019. PMID: 31518347 Free PMC article.
REPAIRtoire--a database of DNA repair pathways.
Milanowska K, Krwawicz J, Papaj G, Kosinski J, Poleszak K, Lesiak J, Osinska E, Rother K, Bujnicki JM. Milanowska K, et al. Among authors: bujnicki jm. Nucleic Acids Res. 2011 Jan;39(Database issue):D788-92. doi: 10.1093/nar/gkq1087. Epub 2010 Nov 4. Nucleic Acids Res. 2011. PMID: 21051355 Free PMC article.
MODOMICS: a database of RNA modification pathways--2013 update.
Machnicka MA, Milanowska K, Osman Oglou O, Purta E, Kurkowska M, Olchowik A, Januszewski W, Kalinowski S, Dunin-Horkawicz S, Rother KM, Helm M, Bujnicki JM, Grosjean H. Machnicka MA, et al. Among authors: bujnicki jm. Nucleic Acids Res. 2013 Jan;41(Database issue):D262-7. doi: 10.1093/nar/gks1007. Epub 2012 Oct 30. Nucleic Acids Res. 2013. PMID: 23118484 Free PMC article.
RNApathwaysDB--a database of RNA maturation and decay pathways.
Milanowska K, Mikolajczak K, Lukasik A, Skorupski M, Balcer Z, Machnicka MA, Nowacka M, Rother KM, Bujnicki JM. Milanowska K, et al. Among authors: bujnicki jm. Nucleic Acids Res. 2013 Jan;41(Database issue):D268-72. doi: 10.1093/nar/gks1052. Epub 2012 Nov 15. Nucleic Acids Res. 2013. PMID: 23155061 Free PMC article.
MODOMICS: a database of RNA modification pathways. 2017 update.
Boccaletto P, Machnicka MA, Purta E, Piatkowski P, Baginski B, Wirecki TK, de Crécy-Lagard V, Ross R, Limbach PA, Kotter A, Helm M, Bujnicki JM. Boccaletto P, et al. Among authors: bujnicki jm. Nucleic Acids Res. 2018 Jan 4;46(D1):D303-D307. doi: 10.1093/nar/gkx1030. Nucleic Acids Res. 2018. PMID: 29106616 Free PMC article.
A combined structural and biochemical approach reveals translocation and stalling of UvrB on the DNA lesion as a mechanism of damage verification in bacterial nucleotide excision repair.
Jaciuk M, Swuec P, Gaur V, Kasprzak JM, Renault L, Dobrychłop M, Nirwal S, Bujnicki JM, Costa A, Nowotny M. Jaciuk M, et al. Among authors: bujnicki jm. DNA Repair (Amst). 2020 Jan;85:102746. doi: 10.1016/j.dnarep.2019.102746. Epub 2019 Nov 6. DNA Repair (Amst). 2020. PMID: 31739207 Free article.
342 results