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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1983 1
1984 1
1988 1
2006 1
2010 1
2011 4
2012 1
2013 3
2014 3
2015 6
2016 5
2017 8
2018 8
2019 9
2020 9
2021 15
2022 6
2023 10
2024 1

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84 results

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Page 1
A transcription factor atlas of directed differentiation.
Joung J, Ma S, Tay T, Geiger-Schuller KR, Kirchgatterer PC, Verdine VK, Guo B, Arias-Garcia MA, Allen WE, Singh A, Kuksenko O, Abudayyeh OO, Gootenberg JS, Fu Z, Macrae RK, Buenrostro JD, Regev A, Zhang F. Joung J, et al. Among authors: buenrostro jd. Cell. 2024 May 1:S0092-8674(24)00464-1. doi: 10.1016/j.cell.2024.04.038. Online ahead of print. Cell. 2024. PMID: 38697106 Free article. No abstract available.
Author Correction: Massively parallel single-cell mitochondrial DNA genotyping and chromatin profiling.
Lareau CA, Ludwig LS, Muus C, Gohil SH, Zhao T, Chiang Z, Pelka K, Verboon JM, Luo W, Christian E, Rosebrock D, Getz G, Boland GM, Chen F, Buenrostro JD, Hacohen N, Wu CJ, Aryee MJ, Regev A, Sankaran VG. Lareau CA, et al. Among authors: buenrostro jd. Nat Biotechnol. 2023 Sep;41(9):1345. doi: 10.1038/s41587-023-01942-1. Nat Biotechnol. 2023. PMID: 37653227 No abstract available.
Epigenetic memory of coronavirus infection in innate immune cells and their progenitors.
Cheong JG, Ravishankar A, Sharma S, Parkhurst CN, Grassmann SA, Wingert CK, Laurent P, Ma S, Paddock L, Miranda IC, Karakaslar EO, Nehar-Belaid D, Thibodeau A, Bale MJ, Kartha VK, Yee JK, Mays MY, Jiang C, Daman AW, Martinez de Paz A, Ahimovic D, Ramos V, Lercher A, Nielsen E, Alvarez-Mulett S, Zheng L, Earl A, Yallowitz A, Robbins L, LaFond E, Weidman KL, Racine-Brzostek S, Yang HS, Price DR, Leyre L, Rendeiro AF, Ravichandran H, Kim J, Borczuk AC, Rice CM, Jones RB, Schenck EJ, Kaner RJ, Chadburn A, Zhao Z, Pascual V, Elemento O, Schwartz RE, Buenrostro JD, Niec RE, Barrat FJ, Lief L, Sun JC, Ucar D, Josefowicz SZ. Cheong JG, et al. Among authors: buenrostro jd. Cell. 2023 Aug 31;186(18):3882-3902.e24. doi: 10.1016/j.cell.2023.07.019. Epub 2023 Aug 18. Cell. 2023. PMID: 37597510
Systematic benchmarking of single-cell ATAC-sequencing protocols.
De Rop FV, Hulselmans G, Flerin C, Soler-Vila P, Rafels A, Christiaens V, González-Blas CB, Marchese D, Caratù G, Poovathingal S, Rozenblatt-Rosen O, Slyper M, Luo W, Muus C, Duarte F, Shrestha R, Bagdatli ST, Corces MR, Mamanova L, Knights A, Meyer KB, Mulqueen R, Taherinasab A, Maschmeyer P, Pezoldt J, Lambert CLG, Iglesias M, Najle SR, Dossani ZY, Martelotto LG, Burkett Z, Lebofsky R, Martin-Subero JI, Pillai S, Sebé-Pedrós A, Deplancke B, Teichmann SA, Ludwig LS, Braun TP, Adey AC, Greenleaf WJ, Buenrostro JD, Regev A, Aerts S, Heyn H. De Rop FV, et al. Among authors: buenrostro jd. Nat Biotechnol. 2023 Aug 3. doi: 10.1038/s41587-023-01881-x. Online ahead of print. Nat Biotechnol. 2023. PMID: 37537502
Positional influence on cellular transcriptional identity revealed through spatially segmented single-cell transcriptomics.
Morse DB, Michalowski AM, Ceribelli M, De Jonghe J, Vias M, Riley D, Davies-Hill T, Voss T, Pittaluga S, Muus C, Liu J, Boyle S, Weitz DA, Brenton JD, Buenrostro JD, Knowles TPJ, Thomas CJ. Morse DB, et al. Among authors: buenrostro jd. Cell Syst. 2023 Jun 21;14(6):464-481.e7. doi: 10.1016/j.cels.2023.05.003. Cell Syst. 2023. PMID: 37348462 Free PMC article.
Heritable transcriptional defects from aberrations of nuclear architecture.
Papathanasiou S, Mynhier NA, Liu S, Brunette G, Stokasimov E, Jacob E, Li L, Comenho C, van Steensel B, Buenrostro JD, Zhang CZ, Pellman D. Papathanasiou S, et al. Among authors: buenrostro jd. Nature. 2023 Jul;619(7968):184-192. doi: 10.1038/s41586-023-06157-7. Epub 2023 Jun 7. Nature. 2023. PMID: 37286600 Free PMC article.
Building Bridges from Genome to Physiology Using Machine Learning and Drosophila Experimental Evolution.
Kezos JN, Barter TT, Phillips MA, Cabral LG, Greenspan ZS, Arnold KR, Azatian G, Buenrostro J, Bhangoo PS, Khong A, Reyes GT, Rahman A, Humphrey LA, Bradley TJ, Mueller LD, Rose MR. Kezos JN, et al. Among authors: buenrostro j. Physiol Biochem Zool. 2023 May-Jun;96(3):192-205. doi: 10.1086/724827. Epub 2023 May 12. Physiol Biochem Zool. 2023. PMID: 37278586
Single-cell multi-scale footprinting reveals the modular organization of DNA regulatory elements.
Hu Y, Ma S, Kartha VK, Duarte FM, Horlbeck M, Zhang R, Shrestha R, Labade A, Kletzien H, Meliki A, Castillo A, Durand N, Mattei E, Anderson LJ, Tay T, Earl AS, Shoresh N, Epstein CB, Wagers A, Buenrostro JD. Hu Y, et al. Among authors: buenrostro jd. bioRxiv [Preprint]. 2023 Mar 29:2023.03.28.533945. doi: 10.1101/2023.03.28.533945. bioRxiv. 2023. PMID: 37034577 Free PMC article. Preprint.
84 results