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The Time Machine framework: monitoring and prediction of biodiversity loss.
Eastwood N, Stubbings WA, Abou-Elwafa Abdallah MA, Durance I, Paavola J, Dallimer M, Pantel JH, Johnson S, Zhou J, Hosking JS, Brown JB, Ullah S, Krause S, Hannah DM, Crawford SE, Widmann M, Orsini L. Eastwood N, et al. Among authors: brown jb. Trends Ecol Evol. 2022 Feb;37(2):138-146. doi: 10.1016/j.tree.2021.09.008. Epub 2021 Nov 9. Trends Ecol Evol. 2022. PMID: 34772522 Review.
Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean-specific genes.
Orsini L, Brown JB, Shams Solari O, Li D, He S, Podicheti R, Stoiber MH, Spanier KI, Gilbert D, Jansen M, Rusch DB, Pfrender ME, Colbourne JK, Frilander MJ, Kvist J, Decaestecker E, De Schamphelaere KAC, De Meester L. Orsini L, et al. Among authors: brown jb. Mol Ecol. 2018 Feb;27(4):886-897. doi: 10.1111/mec.14261. Epub 2017 Aug 19. Mol Ecol. 2018. PMID: 28746735 Free PMC article.
Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors.
Orsini L, Gilbert D, Podicheti R, Jansen M, Brown JB, Solari OS, Spanier KI, Colbourne JK, Rusch DB, Decaestecker E, Asselman J, De Schamphelaere KA, Ebert D, Haag CR, Kvist J, Laforsch C, Petrusek A, Beckerman AP, Little TJ, Chaturvedi A, Pfrender ME, De Meester L, Frilander MJ. Orsini L, et al. Among authors: brown jb. Sci Data. 2016 May 10;3:160030. doi: 10.1038/sdata.2016.30. Sci Data. 2016. PMID: 27164179 Free PMC article.
Pattern of DNA Methylation in Daphnia: Evolutionary Perspective.
Kvist J, Gonçalves Athanàsio C, Shams Solari O, Brown JB, Colbourne JK, Pfrender ME, Mirbahai L. Kvist J, et al. Among authors: brown jb. Genome Biol Evol. 2018 Aug 1;10(8):1988-2007. doi: 10.1093/gbe/evy155. Genome Biol Evol. 2018. PMID: 30060190 Free PMC article.
EcoFABs: advancing microbiome science through standardized fabricated ecosystems.
Zengler K, Hofmockel K, Baliga NS, Behie SW, Bernstein HC, Brown JB, Dinneny JR, Floge SA, Forry SP, Hess M, Jackson SA, Jansson C, Lindemann SR, Pett-Ridge J, Maranas C, Venturelli OS, Wallenstein MD, Shank EA, Northen TR. Zengler K, et al. Among authors: brown jb. Nat Methods. 2019 Jul;16(7):567-571. doi: 10.1038/s41592-019-0465-0. Nat Methods. 2019. PMID: 31227812 Free PMC article.
Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors.
Orsini L, Gilbert D, Podicheti R, Jansen M, Brown JB, Solari OS, Spanier KI, Colbourne JK, Rusch DB, Decaestecker E, Asselman J, De Schamphelaere KA, Ebert D, Haag CR, Kvist J, Laforsch C, Petrusek A, Beckerman AP, Little TJ, Chaturvedi A, Pfrender ME, De Meester L, Frilander MJ. Orsini L, et al. Among authors: brown jb. Sci Data. 2017 Jan 31;4:170006. doi: 10.1038/sdata.2017.6. Sci Data. 2017. PMID: 28140384 Free PMC article. No abstract available.
Exploiting regulatory heterogeneity to systematically identify enhancers with high accuracy.
Arbel H, Basu S, Fisher WW, Hammonds AS, Wan KH, Park S, Weiszmann R, Booth BW, Keranen SV, Henriquez C, Shams Solari O, Bickel PJ, Biggin MD, Celniker SE, Brown JB. Arbel H, et al. Among authors: brown jb. Proc Natl Acad Sci U S A. 2019 Jan 15;116(3):900-908. doi: 10.1073/pnas.1808833115. Epub 2018 Dec 31. Proc Natl Acad Sci U S A. 2019. PMID: 30598455 Free PMC article.
882 results