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Algorithms for computing the triplet and quartet distances for binary and general trees.
Biology (Basel). 2013 Sep 26;2(4):1189-209. doi: 10.3390/biology2041189.
Biology (Basel). 2013.
PMID: 24833220
Free PMC article.
A practical O(n log2 n) time algorithm for computing the triplet distance on binary trees.
Sand A, Brodal GS, Fagerberg R, Pedersen CN, Mailund T.
Sand A, et al. Among authors: brodal gs.
BMC Bioinformatics. 2013;14 Suppl 2(Suppl 2):S18. doi: 10.1186/1471-2105-14-S2-S18. Epub 2013 Jan 21.
BMC Bioinformatics. 2013.
PMID: 23368759
Free PMC article.
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tqDist: a library for computing the quartet and triplet distances between binary or general trees.
Sand A, Holt MK, Johansen J, Brodal GS, Mailund T, Pedersen CN.
Sand A, et al. Among authors: brodal gs.
Bioinformatics. 2014 Jul 15;30(14):2079-80. doi: 10.1093/bioinformatics/btu157. Epub 2014 Mar 20.
Bioinformatics. 2014.
PMID: 24651968
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Computing the all-pairs quartet distance on a set of evolutionary trees.
Stissing M, Mailund T, Pedersen CN, Brodal GS, Fagerberg R.
Stissing M, et al. Among authors: brodal gs.
J Bioinform Comput Biol. 2008 Feb;6(1):37-50. doi: 10.1142/s0219720008003266.
J Bioinform Comput Biol. 2008.
PMID: 18324744
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Recrafting the neighbor-joining method.
Mailund T, Brodal GS, Fagerberg R, Pedersen CN, Phillips D.
Mailund T, et al. Among authors: brodal gs.
BMC Bioinformatics. 2006 Jan 19;7:29. doi: 10.1186/1471-2105-7-29.
BMC Bioinformatics. 2006.
PMID: 16423304
Free PMC article.
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