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Virus Variation Resource--recent updates and future directions.
Brister JR, Bao Y, Zhdanov SA, Ostapchuck Y, Chetvernin V, Kiryutin B, Zaslavsky L, Kimelman M, Tatusova TA. Brister JR, et al. Nucleic Acids Res. 2014 Jan;42(Database issue):D660-5. doi: 10.1093/nar/gkt1268. Epub 2013 Dec 4. Nucleic Acids Res. 2014. PMID: 24304891 Free PMC article.
Virus Variation Resource - improved response to emergent viral outbreaks.
Hatcher EL, Zhdanov SA, Bao Y, Blinkova O, Nawrocki EP, Ostapchuck Y, Schäffer AA, Brister JR. Hatcher EL, et al. Among authors: brister jr. Nucleic Acids Res. 2017 Jan 4;45(D1):D482-D490. doi: 10.1093/nar/gkw1065. Epub 2016 Nov 28. Nucleic Acids Res. 2017. PMID: 27899678 Free PMC article.
Taxonomy of prokaryotic viruses: 2016 update from the ICTV bacterial and archaeal viruses subcommittee.
Adriaenssens EM, Krupovic M, Knezevic P, Ackermann HW, Barylski J, Brister JR, Clokie MR, Duffy S, Dutilh BE, Edwards RA, Enault F, Jang HB, Klumpp J, Kropinski AM, Lavigne R, Poranen MM, Prangishvili D, Rumnieks J, Sullivan MB, Wittmann J, Oksanen HM, Gillis A, Kuhn JH. Adriaenssens EM, et al. Among authors: brister jr. Arch Virol. 2017 Apr;162(4):1153-1157. doi: 10.1007/s00705-016-3173-4. Epub 2016 Dec 31. Arch Virol. 2017. PMID: 28040838 No abstract available.
Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee.
Adriaenssens EM, Sullivan MB, Knezevic P, van Zyl LJ, Sarkar BL, Dutilh BE, Alfenas-Zerbini P, Łobocka M, Tong Y, Brister JR, Moreno Switt AI, Klumpp J, Aziz RK, Barylski J, Uchiyama J, Edwards RA, Kropinski AM, Petty NK, Clokie MRJ, Kushkina AI, Morozova VV, Duffy S, Gillis A, Rumnieks J, Kurtböke İ, Chanishvili N, Goodridge L, Wittmann J, Lavigne R, Jang HB, Prangishvili D, Enault F, Turner D, Poranen MM, Oksanen HM, Krupovic M. Adriaenssens EM, et al. Among authors: brister jr. Arch Virol. 2020 May;165(5):1253-1260. doi: 10.1007/s00705-020-04577-8. Arch Virol. 2020. PMID: 32162068
VADR: validation and annotation of virus sequence submissions to GenBank.
Schäffer AA, Hatcher EL, Yankie L, Shonkwiler L, Brister JR, Karsch-Mizrachi I, Nawrocki EP. Schäffer AA, et al. Among authors: brister jr. BMC Bioinformatics. 2020 May 24;21(1):211. doi: 10.1186/s12859-020-3537-3. BMC Bioinformatics. 2020. PMID: 32448124 Free PMC article.
Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: update of taxonomy changes in 2021.
Krupovic M, Turner D, Morozova V, Dyall-Smith M, Oksanen HM, Edwards R, Dutilh BE, Lehman SM, Reyes A, Baquero DP, Sullivan MB, Uchiyama J, Nakavuma J, Barylski J, Young MJ, Du S, Alfenas-Zerbini P, Kushkina A, Kropinski AM, Kurtböke I, Brister JR, Lood C, Sarkar BL, Yigang T, Liu Y, Huang L, Wittmann J, Chanishvili N, van Zyl LJ, Rumnieks J, Mochizuki T, Jalasvuori M, Aziz RK, Łobocka M, Stedman KM, Shkoporov AN, Gillis A, Peng X, Enault F, Knezevic P, Lavigne R, Rhee SK, Cvirkaite-Krupovic V, Moraru C, Moreno Switt AI, Poranen MM, Millard A, Prangishvili D, Adriaenssens EM. Krupovic M, et al. Among authors: brister jr. Arch Virol. 2021 Nov;166(11):3239-3244. doi: 10.1007/s00705-021-05205-9. Arch Virol. 2021. PMID: 34417873 Free PMC article.
Perspective on taxonomic classification of uncultivated viruses.
Dutilh BE, Varsani A, Tong Y, Simmonds P, Sabanadzovic S, Rubino L, Roux S, Muñoz AR, Lood C, Lefkowitz EJ, Kuhn JH, Krupovic M, Edwards RA, Brister JR, Adriaenssens EM, Sullivan MB. Dutilh BE, et al. Among authors: brister jr. Curr Opin Virol. 2021 Dec;51:207-215. doi: 10.1016/j.coviro.2021.10.011. Epub 2021 Nov 12. Curr Opin Virol. 2021. PMID: 34781105 Free article. Review.
Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee.
Turner D, Shkoporov AN, Lood C, Millard AD, Dutilh BE, Alfenas-Zerbini P, van Zyl LJ, Aziz RK, Oksanen HM, Poranen MM, Kropinski AM, Barylski J, Brister JR, Chanisvili N, Edwards RA, Enault F, Gillis A, Knezevic P, Krupovic M, Kurtböke I, Kushkina A, Lavigne R, Lehman S, Lobocka M, Moraru C, Moreno Switt A, Morozova V, Nakavuma J, Reyes Muñoz A, Rūmnieks J, Sarkar BL, Sullivan MB, Uchiyama J, Wittmann J, Yigang T, Adriaenssens EM. Turner D, et al. Among authors: brister jr. Arch Virol. 2023 Jan 23;168(2):74. doi: 10.1007/s00705-022-05694-2. Arch Virol. 2023. PMID: 36683075 Free PMC article.
57 results