Brass A - Search Results

1

Annotation of environmental OMICS data: application to the transcriptomics domain.

Morrison N, Wood AJ, Hancock D, Shah S, Hakes L, Gray T, Tiwari B, Kille P, Cossins A, Hegarty M, Allen MJ, Wilson WH, Olive P, Last K, Kramer C, Bailhache T, Reeves J, Pallett D, Warne J, Nashar K, Parkinson H, Sansone SA, Rocca-Serra P, Stevens R, Snape J, Brass A, Field D. Morrison N, et al. Among authors: brass a. OMICS. 2006 Summer;10(2):172-8. doi: 10.1089/omi.2006.10.172. OMICS. 2006. PMID: 16901223 Review.

2

maxdLoad2 and maxdBrowse: standards-compliant tools for microarray experimental annotation, data management and dissemination.

Hancock D, Wilson M, Velarde G, Morrison N, Hayes A, Hulme H, Wood AJ, Nashar K, Kell DB, Brass A. Hancock D, et al. Among authors: brass a. BMC Bioinformatics. 2005 Nov 3;6:264. doi: 10.1186/1471-2105-6-264. BMC Bioinformatics. 2005. PMID: 16269077 Free PMC article.

3

ExprAlign--the identification of ESTs in non-model species by alignment of cDNA microarray expression profiles.

Li W, Gracey AY, Mello LV, Brass A, Cossins AR. Li W, et al. Among authors: brass a. BMC Genomics. 2009 Nov 26;10:560. doi: 10.1186/1471-2164-10-560. BMC Genomics. 2009. PMID: 19939286 Free PMC article.

4

The language of gene ontology: a Zipf's law analysis.

Kalankesh LR, Stevens R, Brass A. Kalankesh LR, et al. Among authors: brass a. BMC Bioinformatics. 2012 Jun 7;13:127. doi: 10.1186/1471-2105-13-127. BMC Bioinformatics. 2012. PMID: 22676436 Free PMC article.

5

A systematic strategy for the discovery of candidate genes responsible for phenotypic variation.

Fisher P, Noyes H, Kemp S, Stevens R, Brass A. Fisher P, et al. Among authors: brass a. Methods Mol Biol. 2009;573:329-45. doi: 10.1007/978-1-60761-247-6_18. Methods Mol Biol. 2009. PMID: 19763936 Review.

6

Investigating semantic similarity measures across the Gene Ontology: the relationship between sequence and annotation.

Lord PW, Stevens RD, Brass A, Goble CA. Lord PW, et al. Among authors: brass a. Bioinformatics. 2003 Jul 1;19(10):1275-83. doi: 10.1093/bioinformatics/btg153. Bioinformatics. 2003. PMID: 12835272

7

A systematic strategy for large-scale analysis of genotype phenotype correlations: identification of candidate genes involved in African trypanosomiasis.

Fisher P, Hedeler C, Wolstencroft K, Hulme H, Noyes H, Kemp S, Stevens R, Brass A. Fisher P, et al. Among authors: brass a. Nucleic Acids Res. 2007;35(16):5625-33. doi: 10.1093/nar/gkm623. Epub 2007 Aug 20. Nucleic Acids Res. 2007. PMID: 17709344 Free PMC article.

8

bioNerDS: exploring bioinformatics' database and software use through literature mining.

Duck G, Nenadic G, Brass A, Robertson DL, Stevens R. Duck G, et al. Among authors: brass a. BMC Bioinformatics. 2013 Jun 15;14:194. doi: 10.1186/1471-2105-14-194. BMC Bioinformatics. 2013. PMID: 23768135 Free PMC article.

9

Semantic similarity measures as tools for exploring the gene ontology.

Lord PW, Stevens RD, Brass A, Goble CA. Lord PW, et al. Among authors: brass a. Pac Symp Biocomput. 2003:601-12. doi: 10.1142/9789812776303_0056. Pac Symp Biocomput. 2003. PMID: 12603061 Free article.

10

PhosphaBase: an ontology-driven database resource for protein phosphatases.

Wolstencroft KJ, Stevens R, Tabernero L, Brass A. Wolstencroft KJ, et al. Among authors: brass a. Proteins. 2005 Feb 1;58(2):290-4. doi: 10.1002/prot.20325. Proteins. 2005. PMID: 15558746

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