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A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses.
Hakimzadeh A, Abdala Asbun A, Albanese D, Bernard M, Buchner D, Callahan B, Caporaso JG, Curd E, Djemiel C, Brandström Durling M, Elbrecht V, Gold Z, Gweon HS, Hajibabaei M, Hildebrand F, Mikryukov V, Normandeau E, Özkurt E, M Palmer J, Pascal G, Porter TM, Straub D, Vasar M, Větrovský T, Zafeiropoulos H, Anslan S. Hakimzadeh A, et al. Among authors: brandstrom durling m. Mol Ecol Resour. 2023 Aug 7:10.1111/1755-0998.13847. doi: 10.1111/1755-0998.13847. Online ahead of print. Mol Ecol Resour. 2023. PMID: 37548515
New primers to amplify the fungal ITS2 region--evaluation by 454-sequencing of artificial and natural communities.
Ihrmark K, Bödeker IT, Cruz-Martinez K, Friberg H, Kubartova A, Schenck J, Strid Y, Stenlid J, Brandström-Durling M, Clemmensen KE, Lindahl BD. Ihrmark K, et al. Among authors: brandstrom durling m. FEMS Microbiol Ecol. 2012 Dec;82(3):666-77. doi: 10.1111/j.1574-6941.2012.01437.x. Epub 2012 Jul 27. FEMS Microbiol Ecol. 2012. PMID: 22738186 Free article.
Comparative genomics highlights the importance of drug efflux transporters during evolution of mycoparasitism in Clonostachys subgenus Bionectria (Fungi, Ascomycota, Hypocreales).
Broberg M, Dubey M, Iqbal M, Gudmundssson M, Ihrmark K, Schroers HJ, Funck Jensen D, Brandström Durling M, Karlsson M. Broberg M, et al. Among authors: brandstrom durling m. Evol Appl. 2020 Sep 28;14(2):476-497. doi: 10.1111/eva.13134. eCollection 2021 Feb. Evol Appl. 2020. PMID: 33664789 Free PMC article.
Natural variation of root lesion nematode antagonism in the biocontrol fungus Clonostachys rosea and identification of biocontrol factors through genome-wide association mapping.
Iqbal M, Broberg M, Haarith D, Broberg A, Bushley KE, Brandström Durling M, Viketoft M, Funck Jensen D, Dubey M, Karlsson M. Iqbal M, et al. Among authors: brandstrom durling m. Evol Appl. 2020 Jun 2;13(9):2264-2283. doi: 10.1111/eva.13001. eCollection 2020 Oct. Evol Appl. 2020. PMID: 33005223 Free PMC article.
20 results