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Better together: Elements of successful scientific software development in a distributed collaborative community.
Koehler Leman J, Weitzner BD, Renfrew PD, Lewis SM, Moretti R, Watkins AM, Mulligan VK, Lyskov S, Adolf-Bryfogle J, Labonte JW, Krys J; RosettaCommons Consortium; Bystroff C, Schief W, Gront D, Schueler-Furman O, Baker D, Bradley P, Dunbrack R, Kortemme T, Leaver-Fay A, Strauss CEM, Meiler J, Kuhlman B, Gray JJ, Bonneau R. Koehler Leman J, et al. Among authors: bradley p. PLoS Comput Biol. 2020 May 4;16(5):e1007507. doi: 10.1371/journal.pcbi.1007507. eCollection 2020 May. PLoS Comput Biol. 2020. PMID: 32365137 Free PMC article. Review.
Automated prediction of CASP-5 structures using the Robetta server.
Chivian D, Kim DE, Malmström L, Bradley P, Robertson T, Murphy P, Strauss CE, Bonneau R, Rohl CA, Baker D. Chivian D, et al. Among authors: bradley p. Proteins. 2003;53 Suppl 6:524-33. doi: 10.1002/prot.10529. Proteins. 2003. PMID: 14579342
Free modeling with Rosetta in CASP6.
Bradley P, Malmström L, Qian B, Schonbrun J, Chivian D, Kim DE, Meiler J, Misura KMS, Baker D. Bradley P, et al. Proteins. 2005;61 Suppl 7:128-134. doi: 10.1002/prot.20729. Proteins. 2005. PMID: 16187354
Progress in modeling of protein structures and interactions.
Schueler-Furman O, Wang C, Bradley P, Misura K, Baker D. Schueler-Furman O, et al. Among authors: bradley p. Science. 2005 Oct 28;310(5748):638-42. doi: 10.1126/science.1112160. Science. 2005. PMID: 16254179 Review.
RosettaDock in CAPRI rounds 6-12.
Wang C, Schueler-Furman O, Andre I, London N, Fleishman SJ, Bradley P, Qian B, Baker D. Wang C, et al. Among authors: bradley p. Proteins. 2007 Dec 1;69(4):758-63. doi: 10.1002/prot.21684. Proteins. 2007. PMID: 17671979
Protein-protein docking with backbone flexibility.
Wang C, Bradley P, Baker D. Wang C, et al. Among authors: bradley p. J Mol Biol. 2007 Oct 19;373(2):503-19. doi: 10.1016/j.jmb.2007.07.050. Epub 2007 Aug 2. J Mol Biol. 2007. PMID: 17825317
1,306 results