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microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data.
Nat Microbiol. 2024 Feb;9(2):336-345. doi: 10.1038/s41564-023-01575-9. Epub 2024 Feb 5.
Nat Microbiol. 2024.
PMID: 38316926
Free PMC article.
Visualization of metabolites and microbes at high spatial resolution using MALDI mass spectrometry imaging and in situ fluorescence labeling.
Bourceau P, Geier B, Suerdieck V, Bien T, Soltwisch J, Dreisewerd K, Liebeke M.
Bourceau P, et al.
Nat Protoc. 2023 Oct;18(10):3050-3079. doi: 10.1038/s41596-023-00864-1. Epub 2023 Sep 6.
Nat Protoc. 2023.
PMID: 37674095
Review.
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A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data.
Zuffa S, Schmid R, Bauermeister A, Gomes PWP, Caraballo-Rodriguez AM, Abiead YE, Aron AT, Gentry EC, Zemlin J, Meehan MJ, Avalon NE, Cichewicz RH, Buzun E, Terrazas MC, Hsu CY, Oles R, Ayala AV, Zhao J, Chu H, Kuijpers MCM, Jackrel SL, Tugizimana F, Nephali LP, Dubery IA, Madala NE, Moreira EA, Costa-Lotufo LV, Lopes NP, Rezende-Teixeira P, Jimenez PC, Rimal B, Patterson AD, Traxler MF, de Cassia Pessotti R, Alvarado-Villalobos D, Tamayo-Castillo G, Chaverri P, Escudero-Leyva E, Quiros-Guerrero LM, Bory AJ, Joubert J, Rutz A, Wolfender JL, Allard PM, Sichert A, Pontrelli S, Pullman BS, Bandeira N, Gerwick WH, Gindro K, Massana-Codina J, Wagner BC, Forchhammer K, Petras D, Aiosa N, Garg N, Liebeke M, Bourceau P, Kang KB, Gadhavi H, de Carvalho LPS, Dos Santos MS, Pérez-Lorente AI, Molina-Santiago C, Romero D, Franke R, Brönstrup M, de León AVP, Pope PB, Rosa SL, Barbera G, Roager HM, Laursen MF, Hammerle F, Siewert B, Peintner U, Licona-Cassani C, Rodriguez-Orduña L, Rampler E, Hildebrand F, Koellensperger G, Schoeny H, Hohenwallner K, Panzenboeck L, Gregor R, O'Neill EC, Roxborough ET, Odoi J, Bale NJ, Ding S, Sinninghe Damsté JS, Guan XL, Cui JJ, Ju KS, Silva DB, Silva FMR…
See abstract for full author list ➔
Zuffa S, et al. Among authors: bourceau p.
Res Sq [Preprint]. 2023 Aug 3:rs.3.rs-3189768. doi: 10.21203/rs.3.rs-3189768/v1.
Res Sq. 2023.
PMID: 37577622
Free PMC article.
Updated.
Preprint.
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Sugars dominate the seagrass rhizosphere.
Sogin EM, Michellod D, Gruber-Vodicka HR, Bourceau P, Geier B, Meier DV, Seidel M, Ahmerkamp S, Schorn S, D'Angelo G, Procaccini G, Dubilier N, Liebeke M.
Sogin EM, et al. Among authors: bourceau p.
Nat Ecol Evol. 2022 Jul;6(7):866-877. doi: 10.1038/s41559-022-01740-z. Epub 2022 May 2.
Nat Ecol Evol. 2022.
PMID: 35501482
Free PMC article.
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Adaptability as the key to success for the ubiquitous marine nitrite oxidizer Nitrococcus.
Füssel J, Lücker S, Yilmaz P, Nowka B, van Kessel MAHJ, Bourceau P, Hach PF, Littmann S, Berg J, Spieck E, Daims H, Kuypers MMM, Lam P.
Füssel J, et al. Among authors: bourceau p.
Sci Adv. 2017 Nov 1;3(11):e1700807. doi: 10.1126/sciadv.1700807. eCollection 2017 Nov.
Sci Adv. 2017.
PMID: 29109973
Free PMC article.
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