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Consistent mutational paths predict eukaryotic thermostability.
van Noort V, Bradatsch B, Arumugam M, Amlacher S, Bange G, Creevey C, Falk S, Mende DR, Sinning I, Hurt E, Bork P. van Noort V, et al. Among authors: bork p. BMC Evol Biol. 2013 Jan 10;13:7. doi: 10.1186/1471-2148-13-7. BMC Evol Biol. 2013. PMID: 23305080 Free PMC article.
Comparison of ARM and HEAT protein repeats.
Andrade MA, Petosa C, O'Donoghue SI, Müller CW, Bork P. Andrade MA, et al. Among authors: bork p. J Mol Biol. 2001 May 25;309(1):1-18. doi: 10.1006/jmbi.2001.4624. J Mol Biol. 2001. PMID: 11491282 Review.
STRING 8--a global view on proteins and their functional interactions in 630 organisms.
Jensen LJ, Kuhn M, Stark M, Chaffron S, Creevey C, Muller J, Doerks T, Julien P, Roth A, Simonovic M, Bork P, von Mering C. Jensen LJ, et al. Among authors: bork p. Nucleic Acids Res. 2009 Jan;37(Database issue):D412-6. doi: 10.1093/nar/gkn760. Epub 2008 Oct 21. Nucleic Acids Res. 2009. PMID: 18940858 Free PMC article.
Proteome organization in a genome-reduced bacterium.
Kühner S, van Noort V, Betts MJ, Leo-Macias A, Batisse C, Rode M, Yamada T, Maier T, Bader S, Beltran-Alvarez P, Castaño-Diez D, Chen WH, Devos D, Güell M, Norambuena T, Racke I, Rybin V, Schmidt A, Yus E, Aebersold R, Herrmann R, Böttcher B, Frangakis AS, Russell RB, Serrano L, Bork P, Gavin AC. Kühner S, et al. Among authors: bork p. Science. 2009 Nov 27;326(5957):1235-40. doi: 10.1126/science.1176343. Science. 2009. PMID: 19965468
Drug-induced regulation of target expression.
Iskar M, Campillos M, Kuhn M, Jensen LJ, van Noort V, Bork P. Iskar M, et al. Among authors: bork p. PLoS Comput Biol. 2010 Sep 9;6(9):e1000925. doi: 10.1371/journal.pcbi.1000925. PLoS Comput Biol. 2010. PMID: 20838579 Free PMC article.
SmashCommunity: a metagenomic annotation and analysis tool.
Arumugam M, Harrington ED, Foerstner KU, Raes J, Bork P. Arumugam M, et al. Among authors: bork p. Bioinformatics. 2010 Dec 1;26(23):2977-8. doi: 10.1093/bioinformatics/btq536. Epub 2010 Oct 19. Bioinformatics. 2010. PMID: 20959381
Enterotypes of the human gut microbiome.
Arumugam M, Raes J, Pelletier E, Le Paslier D, Yamada T, Mende DR, Fernandes GR, Tap J, Bruls T, Batto JM, Bertalan M, Borruel N, Casellas F, Fernandez L, Gautier L, Hansen T, Hattori M, Hayashi T, Kleerebezem M, Kurokawa K, Leclerc M, Levenez F, Manichanh C, Nielsen HB, Nielsen T, Pons N, Poulain J, Qin J, Sicheritz-Ponten T, Tims S, Torrents D, Ugarte E, Zoetendal EG, Wang J, Guarner F, Pedersen O, de Vos WM, Brunak S, Doré J; MetaHIT Consortium; Antolín M, Artiguenave F, Blottiere HM, Almeida M, Brechot C, Cara C, Chervaux C, Cultrone A, Delorme C, Denariaz G, Dervyn R, Foerstner KU, Friss C, van de Guchte M, Guedon E, Haimet F, Huber W, van Hylckama-Vlieg J, Jamet A, Juste C, Kaci G, Knol J, Lakhdari O, Layec S, Le Roux K, Maguin E, Mérieux A, Melo Minardi R, M'rini C, Muller J, Oozeer R, Parkhill J, Renault P, Rescigno M, Sanchez N, Sunagawa S, Torrejon A, Turner K, Vandemeulebrouck G, Varela E, Winogradsky Y, Zeller G, Weissenbach J, Ehrlich SD, Bork P. Arumugam M, et al. Among authors: bork p. Nature. 2011 May 12;473(7346):174-80. doi: 10.1038/nature09944. Epub 2011 Apr 20. Nature. 2011. PMID: 21508958 Free PMC article.
688 results