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Learning vector quantization as an interpretable classifier for the detection of SARS-CoV-2 types based on their RNA sequences.
Neural Comput Appl. 2022;34(1):67-78. doi: 10.1007/s00521-021-06018-2. Epub 2021 Apr 27.
Neural Comput Appl. 2022.
PMID: 33935376
Free PMC article.
Virxicon: a lexicon of viral sequences.
Kudla M, Gutowska K, Synak J, Weber M, Bohnsack KS, Lukasiak P, Villmann T, Blazewicz J, Szachniuk M.
Kudla M, et al. Among authors: bohnsack ks.
Bioinformatics. 2021 Apr 1;36(22-23):5507-5513. doi: 10.1093/bioinformatics/btaa1066.
Bioinformatics. 2021.
PMID: 33367605
Free PMC article.
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The Resolved Mutual Information Function as a Structural Fingerprint of Biomolecular Sequences for Interpretable Machine Learning Classifiers.
Bohnsack KS, Kaden M, Abel J, Saralajew S, Villmann T.
Bohnsack KS, et al.
Entropy (Basel). 2021 Oct 17;23(10):1357. doi: 10.3390/e23101357.
Entropy (Basel). 2021.
PMID: 34682081
Free PMC article.
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Alignment-Free Sequence Comparison: A Systematic Survey From a Machine Learning Perspective.
Bohnsack KS, Kaden M, Abel J, Villmann T.
Bohnsack KS, et al.
IEEE/ACM Trans Comput Biol Bioinform. 2023 Jan-Feb;20(1):119-135. doi: 10.1109/TCBB.2022.3140873. Epub 2023 Feb 3.
IEEE/ACM Trans Comput Biol Bioinform. 2023.
PMID: 34990369
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