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Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Bogaerts B, Van den Bossche A, Verhaegen B, Delbrassinne L, Mattheus W, Nouws S, Godfroid M, Hoffman S, Roosens NHC, De Keersmaecker SCJ, Vanneste K. Bogaerts B, et al. J Clin Microbiol. 2024 May 8;62(5):e0157623. doi: 10.1128/jcm.01576-23. Epub 2024 Mar 5. J Clin Microbiol. 2024. PMID: 38441926 Free PMC article.
Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B2 products sold on the Belgian market using whole-genome sequencing.
Bogaerts B, Fraiture MA, Huwaert A, Van Nieuwenhuysen T, Jacobs B, Van Hoorde K, De Keersmaecker SCJ, Roosens NHC, Vanneste K. Bogaerts B, et al. Front Microbiol. 2023 Jun 21;14:1173594. doi: 10.3389/fmicb.2023.1173594. eCollection 2023. Front Microbiol. 2023. PMID: 37415815 Free PMC article.
Population Analysis of O26 Shiga Toxin-Producing Escherichia coli Causing Hemolytic Uremic Syndrome in Italy, 1989-2020, Through Whole Genome Sequencing.
Michelacci V, Montalbano Di Filippo M, Gigliucci F, Arancia S, Chiani P, Minelli F, Roosens NHC, De Keersmaecker SCJ, Bogaerts B, Vanneste K, Morabito S. Michelacci V, et al. Among authors: bogaerts b. Front Cell Infect Microbiol. 2022 Feb 9;12:842508. doi: 10.3389/fcimb.2022.842508. eCollection 2022. Front Cell Infect Microbiol. 2022. PMID: 35223557 Free PMC article.
Whole-Genome Sequencing-Based Antimicrobial Resistance Characterization and Phylogenomic Investigation of 19 Multidrug-Resistant and Extended-Spectrum Beta-Lactamase-Positive Escherichia coli Strains Collected From Hospital Patients in Benin in 2019.
Yehouenou CL, Bogaerts B, De Keersmaecker SCJ, Roosens NHC, Marchal K, Tchiakpe E, Affolabi D, Simon A, Dossou FM, Vanneste K, Dalleur O. Yehouenou CL, et al. Among authors: bogaerts b. Front Microbiol. 2021 Dec 9;12:752883. doi: 10.3389/fmicb.2021.752883. eCollection 2021. Front Microbiol. 2021. PMID: 34956117 Free PMC article.
30 results