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Human influenza virus challenge identifies cellular correlates of protection for oral vaccination.
Cell Host Microbe. 2021 Dec 8;29(12):1828-1837.e5. doi: 10.1016/j.chom.2021.10.009. Epub 2021 Nov 15.
Cell Host Microbe. 2021.
PMID: 34784508
Free PMC article.
A data-driven health index for neonatal morbidities.
De Francesco D, Blumenfeld YJ, Marić I, Mayo JA, Chang AL, Fallahzadeh R, Phongpreecha T, Butwick AJ, Xenochristou M, Phibbs CS, Bidoki NH, Becker M, Culos A, Espinosa C, Liu Q, Sylvester KG, Gaudilliere B, Angst MS, Stevenson DK, Shaw GM, Aghaeepour N.
De Francesco D, et al. Among authors: bidoki nh.
iScience. 2022 Mar 22;25(4):104143. doi: 10.1016/j.isci.2022.104143. eCollection 2022 Apr 15.
iScience. 2022.
PMID: 35402862
Free PMC article.
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Large-scale correlation network construction for unraveling the coordination of complex biological systems.
Becker M, Nassar H, Espinosa C, Stelzer IA, Feyaerts D, Berson E, Bidoki NH, Chang AL, Saarunya G, Culos A, De Francesco D, Fallahzadeh R, Liu Q, Kim Y, Marić I, Mataraso SJ, Payrovnaziri SN, Phongpreecha T, Ravindra NG, Stanley N, Shome S, Tan Y, Thuraiappah M, Xenochristou M, Xue L, Shaw G, Stevenson D, Angst MS, Gaudilliere B, Aghaeepour N.
Becker M, et al. Among authors: bidoki nh.
Nat Comput Sci. 2023 Apr;3(4):346-359. doi: 10.1038/s43588-023-00429-y. Epub 2023 Apr 13.
Nat Comput Sci. 2023.
PMID: 38116462
Free PMC article.
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Machine learning models of plasma proteomic data predict mood in chronic stroke and tie it to aberrant peripheral immune responses.
Bidoki NH, Zera KA, Nassar H, Drag LL, Mlynash M, Osborn E, Musabbir M, Kim DE, Paula Mendez M, Lansberg MG, Aghaeepour N, Buckwalter MS.
Bidoki NH, et al.
Brain Behav Immun. 2023 Nov;114:144-153. doi: 10.1016/j.bbi.2023.08.002. Epub 2023 Aug 7.
Brain Behav Immun. 2023.
PMID: 37557961
Review.
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In-silico generation of high-dimensional immune response data in patients using a deep neural network.
Fallahzadeh R, Bidoki NH, Stelzer IA, Becker M, Marić I, Chang AL, Culos A, Phongpreecha T, Xenochristou M, De Francesco D, Espinosa C, Berson E, Verdonk F, Angst MS, Gaudilliere B, Aghaeepour N.
Fallahzadeh R, et al. Among authors: bidoki nh.
Cytometry A. 2023 May;103(5):392-404. doi: 10.1002/cyto.a.24709. Epub 2022 Dec 27.
Cytometry A. 2023.
PMID: 36507780
Free PMC article.
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