Bi Y - Search Results

1

Exome sequencing identifies gene variants and networks associated with extreme respiratory outcomes following preterm birth.

Hamvas A, Feng R, Bi Y, Wang F, Bhattacharya S, Mereness J, Kaushal M, Cotten CM, Ballard PL, Mariani TJ; PROP Investigators. Hamvas A, et al. Among authors: bi y. BMC Genet. 2018 Oct 20;19(1):94. doi: 10.1186/s12863-018-0679-7. BMC Genet. 2018. PMID: 30342483 Free PMC article.

2

NPEBseq: nonparametric empirical bayesian-based procedure for differential expression analysis of RNA-seq data.

Bi Y, Davuluri RV. Bi Y, et al. BMC Bioinformatics. 2013 Aug 27;14:262. doi: 10.1186/1471-2105-14-262. BMC Bioinformatics. 2013. PMID: 23981227 Free PMC article.

3

Identification of Genetic and Epigenetic Variants Associated with Breast Cancer Prognosis by Integrative Bioinformatics Analysis.

Shilpi A, Bi Y, Jung S, Patra SK, Davuluri RV. Shilpi A, et al. Among authors: bi y. Cancer Inform. 2017 Jan 9;16:1-13. doi: 10.4137/CIN.S39783. eCollection 2017. Cancer Inform. 2017. PMID: 28096648 Free PMC article.

4

MNK Inhibition Disrupts Mesenchymal Glioma Stem Cells and Prolongs Survival in a Mouse Model of Glioblastoma.

Bell JB, Eckerdt FD, Alley K, Magnusson LP, Hussain H, Bi Y, Arslan AD, Clymer J, Alvarez AA, Goldman S, Cheng SY, Nakano I, Horbinski C, Davuluri RV, James CD, Platanias LC. Bell JB, et al. Among authors: bi y. Mol Cancer Res. 2016 Oct;14(10):984-993. doi: 10.1158/1541-7786.MCR-16-0172. Epub 2016 Jun 30. Mol Cancer Res. 2016. PMID: 27364770 Free PMC article.

5

Distinct mechanisms control genome recognition by p53 at its target genes linked to different cell fates.

Farkas M, Hashimoto H, Bi Y, Davuluri RV, Resnick-Silverman L, Manfredi JJ, Debler EW, McMahon SB. Farkas M, et al. Among authors: bi y. Nat Commun. 2021 Jan 20;12(1):484. doi: 10.1038/s41467-020-20783-z. Nat Commun. 2021. PMID: 33473123 Free PMC article.

6

IsoformEx: isoform level gene expression estimation using weighted non-negative least squares from mRNA-Seq data.

Kim H, Bi Y, Pal S, Gupta R, Davuluri RV. Kim H, et al. Among authors: bi y. BMC Bioinformatics. 2011 Jul 27;12:305. doi: 10.1186/1471-2105-12-305. BMC Bioinformatics. 2011. PMID: 21794104 Free PMC article.

7

Isoform level expression profiles provide better cancer signatures than gene level expression profiles.

Zhang Z, Pal S, Bi Y, Tchou J, Davuluri RV. Zhang Z, et al. Among authors: bi y. Genome Med. 2013 Apr 17;5(4):33. doi: 10.1186/gm437. eCollection 2013. Genome Med. 2013. PMID: 23594586 Free PMC article.

8

Cancer-Associated IDH1 Promotes Growth and Resistance to Targeted Therapies in the Absence of Mutation.

Calvert AE, Chalastanis A, Wu Y, Hurley LA, Kouri FM, Bi Y, Kachman M, May JL, Bartom E, Hua Y, Mishra RK, Schiltz GE, Dubrovskyi O, Mazar AP, Peter ME, Zheng H, James CD, Burant CF, Chandel NS, Davuluri RV, Horbinski C, Stegh AH. Calvert AE, et al. Among authors: bi y. Cell Rep. 2017 May 30;19(9):1858-1873. doi: 10.1016/j.celrep.2017.05.014. Cell Rep. 2017. PMID: 28564604 Free PMC article.

9

Characterization of brain tumor initiating cells isolated from an animal model of CNS primitive neuroectodermal tumors.

Malchenko S, Sredni ST, Boyineni J, Bi Y, Margaryan NV, Guda MR, Kostenko Y, Tomita T, Davuluri RV, Velpula K, Hendrix MJC, Soares MB. Malchenko S, et al. Among authors: bi y. Oncotarget. 2018 Feb 9;9(17):13733-13747. doi: 10.18632/oncotarget.24460. eCollection 2018 Mar 2. Oncotarget. 2018. PMID: 29568390 Free PMC article.

10

Imaging patterns predict patient survival and molecular subtype in glioblastoma via machine learning techniques.

Macyszyn L, Akbari H, Pisapia JM, Da X, Attiah M, Pigrish V, Bi Y, Pal S, Davuluri RV, Roccograndi L, Dahmane N, Martinez-Lage M, Biros G, Wolf RL, Bilello M, O'Rourke DM, Davatzikos C. Macyszyn L, et al. Among authors: bi y. Neuro Oncol. 2016 Mar;18(3):417-25. doi: 10.1093/neuonc/nov127. Epub 2015 Jul 16. Neuro Oncol. 2016. PMID: 26188015 Free PMC article.

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