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The synergistic effect of concatenation in phylogenomics: the case in Pantoea.
Palmer M, Venter SN, McTaggart AR, Coetzee MPA, Van Wyk S, Avontuur JR, Beukes CW, Fourie G, Santana QC, Van Der Nest MA, Blom J, Steenkamp ET. Palmer M, et al. Among authors: beukes cw. PeerJ. 2019 Apr 16;7:e6698. doi: 10.7717/peerj.6698. eCollection 2019. PeerJ. 2019. PMID: 31024760 Free PMC article.
Practically delineating bacterial species with genealogical concordance.
Venter SN, Palmer M, Beukes CW, Chan WY, Shin G, van Zyl E, Seale T, Coutinho TA, Steenkamp ET. Venter SN, et al. Among authors: beukes cw. Antonie Van Leeuwenhoek. 2017 Oct;110(10):1311-1325. doi: 10.1007/s10482-017-0869-8. Epub 2017 Apr 9. Antonie Van Leeuwenhoek. 2017. PMID: 28393289
Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato.
Beukes CW, Palmer M, Manyaka P, Chan WY, Avontuur JR, van Zyl E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Blom J, Whitman WB, Venter SN, Steenkamp ET. Beukes CW, et al. Front Microbiol. 2017 Jun 26;8:1154. doi: 10.3389/fmicb.2017.01154. eCollection 2017. Front Microbiol. 2017. PMID: 28694797 Free PMC article.
Corrigendum: Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato.
Beukes CW, Palmer M, Manyaka P, Chan WY, Avontuur JR, van Zyl E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Blom J, Whitman WB, Venter SN, Steenkamp ET. Beukes CW, et al. Front Microbiol. 2018 Mar 2;9:373. doi: 10.3389/fmicb.2018.00373. eCollection 2018. Front Microbiol. 2018. PMID: 29576763 Free PMC article.
Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae.
Estrada-de Los Santos P, Palmer M, Chávez-Ramírez B, Beukes C, Steenkamp ET, Briscoe L, Khan N, Maluk M, Lafos M, Humm E, Arrabit M, Crook M, Gross E, Simon MF, Dos Reis Junior FB, Whitman WB, Shapiro N, Poole PS, Hirsch AM, Venter SN, James EK. Estrada-de Los Santos P, et al. Genes (Basel). 2018 Aug 1;9(8):389. doi: 10.3390/genes9080389. Genes (Basel). 2018. PMID: 30071618 Free PMC article.
Genome-informed Bradyrhizobium taxonomy: where to from here?
Avontuur JR, Palmer M, Beukes CW, Chan WY, Coetzee MPA, Blom J, Stępkowski T, Kyrpides NC, Woyke T, Shapiro N, Whitman WB, Venter SN, Steenkamp ET. Avontuur JR, et al. Among authors: beukes cw. Syst Appl Microbiol. 2019 Jul;42(4):427-439. doi: 10.1016/j.syapm.2019.03.006. Epub 2019 Apr 4. Syst Appl Microbiol. 2019. PMID: 31031014
18 results