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Analysis of germline-driven ancestry-associated gene expression in cancers.
Chambwe N, Sayaman RW, Hu D, Huntsman S; Cancer Genome Analysis Network; Kemal A, Caesar-Johnson S, Zenklusen JC, Ziv E, Beroukhim R, Cherniack AD. Chambwe N, et al. Among authors: beroukhim r. STAR Protoc. 2022 Jul 31;3(3):101586. doi: 10.1016/j.xpro.2022.101586. eCollection 2022 Sep 16. STAR Protoc. 2022. PMID: 35942349 Free PMC article.
Allele-specific amplification in cancer revealed by SNP array analysis.
LaFramboise T, Weir BA, Zhao X, Beroukhim R, Li C, Harrington D, Sellers WR, Meyerson M. LaFramboise T, et al. Among authors: beroukhim r. PLoS Comput Biol. 2005 Nov;1(6):e65. doi: 10.1371/journal.pcbi.0010065. Epub 2005 Nov 25. PLoS Comput Biol. 2005. PMID: 16322765 Free PMC article.
"Lineage addiction" in human cancer: lessons from integrated genomics.
Garraway LA, Weir BA, Zhao X, Widlund H, Beroukhim R, Berger A, Rimm D, Rubin MA, Fisher DE, Meyerson ML, Sellers WR. Garraway LA, et al. Among authors: beroukhim r. Cold Spring Harb Symp Quant Biol. 2005;70:25-34. doi: 10.1101/sqb.2005.70.016. Cold Spring Harb Symp Quant Biol. 2005. PMID: 16869735
Major copy proportion analysis of tumor samples using SNP arrays.
Li C, Beroukhim R, Weir BA, Winckler W, Garraway LA, Sellers WR, Meyerson M. Li C, et al. Among authors: beroukhim r. BMC Bioinformatics. 2008 Apr 21;9:204. doi: 10.1186/1471-2105-9-204. BMC Bioinformatics. 2008. PMID: 18426588 Free PMC article.
Patterns of gene expression and copy-number alterations in von-hippel lindau disease-associated and sporadic clear cell carcinoma of the kidney.
Beroukhim R, Brunet JP, Di Napoli A, Mertz KD, Seeley A, Pires MM, Linhart D, Worrell RA, Moch H, Rubin MA, Sellers WR, Meyerson M, Linehan WM, Kaelin WG Jr, Signoretti S. Beroukhim R, et al. Cancer Res. 2009 Jun 1;69(11):4674-81. doi: 10.1158/0008-5472.CAN-09-0146. Cancer Res. 2009. PMID: 19470766 Free PMC article.
Absolute quantification of somatic DNA alterations in human cancer.
Carter SL, Cibulskis K, Helman E, McKenna A, Shen H, Zack T, Laird PW, Onofrio RC, Winckler W, Weir BA, Beroukhim R, Pellman D, Levine DA, Lander ES, Meyerson M, Getz G. Carter SL, et al. Among authors: beroukhim r. Nat Biotechnol. 2012 May;30(5):413-21. doi: 10.1038/nbt.2203. Nat Biotechnol. 2012. PMID: 22544022 Free PMC article.
395 results