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Multiomics reveal unique signatures of human epiploic adipose tissue related to systemic insulin resistance.
Krieg L, Didt K, Karkossa I, Bernhart SH, Kehr S, Subramanian N, Lindhorst A, Schaudinn A, Tabei S, Keller M, Stumvoll M, Dietrich A, von Bergen M, Stadler PF, Laurencikiene J, Krüger M, Blüher M, Gericke M, Schubert K, Kovacs P, Chakaroun R, Massier L. Krieg L, et al. Among authors: bernhart sh. Gut. 2022 Nov;71(11):2179-2193. doi: 10.1136/gutjnl-2021-324603. Epub 2021 Oct 1. Gut. 2022. PMID: 34598978 Free PMC article.
Alignment of RNA base pairing probability matrices.
Hofacker IL, Bernhart SH, Stadler PF. Hofacker IL, et al. Among authors: bernhart sh. Bioinformatics. 2004 Sep 22;20(14):2222-7. doi: 10.1093/bioinformatics/bth229. Epub 2004 Apr 8. Bioinformatics. 2004. PMID: 15073017
2D meets 4G: G-quadruplexes in RNA secondary structure prediction.
Lorenz R, Bernhart SH, Qin J, Höner zu Siederdissen C, Tanzer A, Amman F, Hofacker IL, Stadler PF. Lorenz R, et al. Among authors: bernhart sh. IEEE/ACM Trans Comput Biol Bioinform. 2013 Jul-Aug;10(4):832-44. doi: 10.1109/TCBB.2013.7. IEEE/ACM Trans Comput Biol Bioinform. 2013. PMID: 24334379
Temperature-responsive in vitro RNA structurome of Yersinia pseudotuberculosis.
Righetti F, Nuss AM, Twittenhoff C, Beele S, Urban K, Will S, Bernhart SH, Stadler PF, Dersch P, Narberhaus F. Righetti F, et al. Among authors: bernhart sh. Proc Natl Acad Sci U S A. 2016 Jun 28;113(26):7237-42. doi: 10.1073/pnas.1523004113. Epub 2016 Jun 13. Proc Natl Acad Sci U S A. 2016. PMID: 27298343 Free PMC article.
Beyond the 3'UTR binding-microRNA-induced protein truncation via DNA binding.
von Brandenstein M, Bernhart SH, Pansky A, Richter C, Kohl T, Deckert M, Heidenreich A, Stadler PF, Montesinos-Rongen M, Fries JWU. von Brandenstein M, et al. Among authors: bernhart sh. Oncotarget. 2018 Aug 28;9(67):32855-32867. doi: 10.18632/oncotarget.26023. eCollection 2018 Aug 28. Oncotarget. 2018. PMID: 30214689 Free PMC article.
119 results