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Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis.
Kawahara R, Chernykh A, Alagesan K, Bern M, Cao W, Chalkley RJ, Cheng K, Choo MS, Edwards N, Goldman R, Hoffmann M, Hu Y, Huang Y, Kim JY, Kletter D, Liquet B, Liu M, Mechref Y, Meng B, Neelamegham S, Nguyen-Khuong T, Nilsson J, Pap A, Park GW, Parker BL, Pegg CL, Penninger JM, Phung TK, Pioch M, Rapp E, Sakalli E, Sanda M, Schulz BL, Scott NE, Sofronov G, Stadlmann J, Vakhrushev SY, Woo CM, Wu HY, Yang P, Ying W, Zhang H, Zhang Y, Zhao J, Zaia J, Haslam SM, Palmisano G, Yoo JS, Larson G, Khoo KH, Medzihradszky KF, Kolarich D, Packer NH, Thaysen-Andersen M. Kawahara R, et al. Among authors: bern m. Nat Methods. 2021 Nov;18(11):1304-1316. doi: 10.1038/s41592-021-01309-x. Epub 2021 Nov 1. Nat Methods. 2021. PMID: 34725484 Free PMC article.
Toward Automated N-Glycopeptide Identification in Glycoproteomics.
Lee LY, Moh ES, Parker BL, Bern M, Packer NH, Thaysen-Andersen M. Lee LY, et al. Among authors: bern m. J Proteome Res. 2016 Oct 7;15(10):3904-3915. doi: 10.1021/acs.jproteome.6b00438. Epub 2016 Sep 2. J Proteome Res. 2016. PMID: 27519006
Characterizing Protein Glycosylation through On-Chip Glycan Modification and Probing.
Reatini BS, Ensink E, Liau B, Sinha JY, Powers TW, Partyka K, Bern M, Brand RE, Rudd PM, Kletter D, Drake R, Haab BB. Reatini BS, et al. Among authors: bern m. Anal Chem. 2016 Dec 6;88(23):11584-11592. doi: 10.1021/acs.analchem.6b02998. Epub 2016 Nov 15. Anal Chem. 2016. PMID: 27809484 Free PMC article.
178 results