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ESTprep: preprocessing cDNA sequence reads.
Scheetz TE, Trivedi N, Roberts CA, Kucaba T, Berger B, Robinson NL, Birkett CL, Gavin AJ, O'Leary B, Braun TA, Bonaldo MF, Robinson JP, Sheffield VC, Soares MB, Casavant TL. Scheetz TE, et al. Among authors: berger b. Bioinformatics. 2003 Jul 22;19(11):1318-24. doi: 10.1093/bioinformatics/btg159. Bioinformatics. 2003. PMID: 12874042
High-throughput gene discovery in the rat.
Scheetz TE, Laffin JJ, Berger B, Holte S, Baumes SA, Brown R 2nd, Chang S, Coco J, Conklin J, Crouch K, Donohue M, Doonan G, Estes C, Eyestone M, Fishler K, Gardiner J, Guo L, Johnson B, Keppel C, Kreger R, Lebeck M, Marcelino R, Miljkovich V, Perdue M, Qui L, Rehmann J, Reiter RS, Rhoads B, Schaefer K, Smith C, Sunjevaric I, Trout K, Wu N, Birkett CL, Bischof J, Gackle B, Gavin A, Grundstad AJ, Mokrzycki B, Moressi C, O'Leary B, Pedretti K, Roberts C, Robinson NL, Smith M, Tack D, Trivedi N, Kucaba T, Freeman T, Lin JJ, Bonaldo MF, Casavant TL, Sheffield VC, Soares MB. Scheetz TE, et al. Among authors: berger b. Genome Res. 2004 Apr;14(4):733-41. doi: 10.1101/gr.1414204. Genome Res. 2004. PMID: 15060017 Free PMC article.
1274 full-open reading frames of transcripts expressed in the developing mouse nervous system.
Bonaldo MF, Bair TB, Scheetz TE, Snir E, Akabogu I, Bair JL, Berger B, Crouch K, Davis A, Eyestone ME, Keppel C, Kucaba TA, Lebeck M, Lin JL, de Melo AI, Rehmann J, Reiter RS, Schaefer K, Smith C, Tack D, Trout K, Sheffield VC, Lin JJ, Casavant TL, Soares MB. Bonaldo MF, et al. Among authors: berger b. Genome Res. 2004 Oct;14(10B):2053-63. doi: 10.1101/gr.2601304. Genome Res. 2004. PMID: 15489326 Free PMC article.
Rapid and accurate prediction of protein homo-oligomer symmetry with Seq2Symm.
Kshirsagar M, Meller A, Humphreys I, Sledzieski S, Xu Y, Dodhia R, Horvitz E, Berger B, Bowman G, Ferres JL, Baker D, Baek M. Kshirsagar M, et al. Among authors: berger b. Res Sq [Preprint]. 2024 Apr 26:rs.3.rs-4215086. doi: 10.21203/rs.3.rs-4215086/v1. Res Sq. 2024. PMID: 38746169 Free PMC article. Preprint.
Scalable and Privacy-Preserving Federated Principal Component Analysis.
Froelicher D, Cho H, Edupalli M, Sousa JS, Bossuat JP, Pyrgelis A, Troncoso-Pastoriza JR, Berger B, Hubaux JP. Froelicher D, et al. Among authors: berger b. Proc IEEE Symp Secur Priv. 2023 May;2023:1908-1925. doi: 10.1109/sp46215.2023.10179350. Epub 2023 Jul 21. Proc IEEE Symp Secur Priv. 2023. PMID: 38665901 Free PMC article.
1,516 results