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Maximum entropy principle applied to semiflexible ring polymers.
J Chem Phys. 2011 Sep 7;135(9):094901. doi: 10.1063/1.3631943.
J Chem Phys. 2011.
PMID: 21913779
Cospectral polymers: Differentiation via semiflexibility.
Dolgushev M, Berezovska G, Blumen A.
Dolgushev M, et al. Among authors: berezovska g.
J Chem Phys. 2010 Oct 21;133(15):154905. doi: 10.1063/1.3505147.
J Chem Phys. 2010.
PMID: 20969424
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Accounting for the kinetics in order parameter analysis: lessons from theoretical models and a disordered peptide.
Berezovska G, Prada-Gracia D, Mostarda S, Rao F.
Berezovska G, et al.
J Chem Phys. 2012 Nov 21;137(19):194101. doi: 10.1063/1.4764868.
J Chem Phys. 2012.
PMID: 23181288
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Consensus for the Fip35 folding mechanism?
Berezovska G, Prada-Gracia D, Rao F.
Berezovska G, et al.
J Chem Phys. 2013 Jul 21;139(3):035102. doi: 10.1063/1.4812837.
J Chem Phys. 2013.
PMID: 23883056
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A comparative analysis of clustering algorithms: O2 migration in truncated hemoglobin I from transition networks.
Cazade PA, Zheng W, Prada-Gracia D, Berezovska G, Rao F, Clementi C, Meuwly M.
Cazade PA, et al. Among authors: berezovska g.
J Chem Phys. 2015 Jan 14;142(2):025103. doi: 10.1063/1.4904431.
J Chem Phys. 2015.
PMID: 25591387
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Coupled protein-ligand dynamics in truncated hemoglobin N from atomistic simulations and transition networks.
Cazade PA, Berezovska G, Meuwly M.
Cazade PA, et al. Among authors: berezovska g.
Biochim Biophys Acta. 2015 May;1850(5):996-1005. doi: 10.1016/j.bbagen.2014.09.008. Epub 2014 Sep 16.
Biochim Biophys Acta. 2015.
PMID: 25224733
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