Bentley DL - Search Results

1

Genome-wide Mapping of 5'-monophosphorylated Ends of Mammalian Nascent RNA Transcripts.

Cortázar MA, Fong N, Bentley DL. Cortázar MA, et al. Among authors: bentley dl. Bio Protoc. 2023 Sep 20;13(18):e4828. doi: 10.21769/BioProtoc.4828. eCollection 2023 Sep 20. Bio Protoc. 2023. PMID: 37753464 Free PMC article.

2

Mediator kinase inhibition suppresses hyperactive interferon signaling in Down syndrome.

Cozzolino K, Sanford L, Hunter S, Molison K, Erickson B, Jones T, Ajit D, Galbraith MD, Espinosa JM, Bentley DL, Allen MA, Dowell RD, Taatjes DJ. Cozzolino K, et al. Among authors: bentley dl. bioRxiv [Preprint]. 2023 Dec 13:2023.07.05.547813. doi: 10.1101/2023.07.05.547813. bioRxiv. 2023. PMID: 37461585 Free PMC article. Preprint.

3

Pre-mRNA splicing and its cotranscriptional connections.

Shenasa H, Bentley DL. Shenasa H, et al. Among authors: bentley dl. Trends Genet. 2023 Sep;39(9):672-685. doi: 10.1016/j.tig.2023.04.008. Epub 2023 May 24. Trends Genet. 2023. PMID: 37236814 Review.

4

Nucleotide-level linkage of transcriptional elongation and polyadenylation.

Geisberg JV, Moqtaderi Z, Fong N, Erickson B, Bentley DL, Struhl K. Geisberg JV, et al. Among authors: bentley dl. Elife. 2022 Nov 24;11:e83153. doi: 10.7554/eLife.83153. Elife. 2022. PMID: 36421680 Free PMC article.

5

Xrn2 substrate mapping identifies torpedo loading sites and extensive premature termination of RNA pol II transcription.

Cortazar MA, Erickson B, Fong N, Pradhan SJ, Ntini E, Bentley DL. Cortazar MA, et al. Among authors: bentley dl. Genes Dev. 2022 Oct 1;36(19-20):1062-1078. doi: 10.1101/gad.350004.122. Epub 2022 Nov 17. Genes Dev. 2022. PMID: 36396340 Free PMC article.

6

The pausing zone and control of RNA polymerase II elongation by Spt5: Implications for the pause-release model.

Fong N, Sheridan RM, Ramachandran S, Bentley DL. Fong N, et al. Among authors: bentley dl. Mol Cell. 2022 Oct 6;82(19):3632-3645.e4. doi: 10.1016/j.molcel.2022.09.001. Mol Cell. 2022. PMID: 36206739 Free PMC article.

7

LABRAT reveals association of alternative polyadenylation with transcript localization, RNA binding protein expression, transcription speed, and cancer survival.

Goering R, Engel KL, Gillen AE, Fong N, Bentley DL, Taliaferro JM. Goering R, et al. Among authors: bentley dl. BMC Genomics. 2021 Jun 26;22(1):476. doi: 10.1186/s12864-021-07781-1. BMC Genomics. 2021. PMID: 34174817 Free PMC article.

8

Alternative RNA structures formed during transcription depend on elongation rate and modify RNA processing.

Saldi T, Riemondy K, Erickson B, Bentley DL. Saldi T, et al. Among authors: bentley dl. Mol Cell. 2021 Apr 15;81(8):1789-1801.e5. doi: 10.1016/j.molcel.2021.01.040. Epub 2021 Feb 24. Mol Cell. 2021. PMID: 33631106 Free PMC article.

9

Selective inhibition of CDK7 reveals high-confidence targets and new models for TFIIH function in transcription.

Rimel JK, Poss ZC, Erickson B, Maas ZL, Ebmeier CC, Johnson JL, Decker TM, Yaron TM, Bradley MJ, Hamman KB, Hu S, Malojcic G, Marineau JJ, White PW, Brault M, Tao L, DeRoy P, Clavette C, Nayak S, Damon LJ, Kaltheuner IH, Bunch H, Cantley LC, Geyer M, Iwasa J, Dowell RD, Bentley DL, Old WM, Taatjes DJ. Rimel JK, et al. Among authors: bentley dl. Genes Dev. 2020 Nov 1;34(21-22):1452-1473. doi: 10.1101/gad.341545.120. Epub 2020 Oct 15. Genes Dev. 2020. PMID: 33060135 Free PMC article.

10

Control of RNA Pol II Speed by PNUTS-PP1 and Spt5 Dephosphorylation Facilitates Termination by a "Sitting Duck Torpedo" Mechanism.

Cortazar MA, Sheridan RM, Erickson B, Fong N, Glover-Cutter K, Brannan K, Bentley DL. Cortazar MA, et al. Among authors: bentley dl. Mol Cell. 2019 Dec 19;76(6):896-908.e4. doi: 10.1016/j.molcel.2019.09.031. Epub 2019 Oct 30. Mol Cell. 2019. PMID: 31677974 Free PMC article.

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