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Time-aligned hourglass gastrulation models in rabbit and mouse.
Cell. 2023 Jun 8;186(12):2610-2627.e18. doi: 10.1016/j.cell.2023.04.037. Epub 2023 May 19.
Cell. 2023.
PMID: 37209682
Free article.
Dissection of floral transition by single-meristem transcriptomes at high temporal resolution.
Meir Z, Aviezer I, Chongloi GL, Ben-Kiki O, Bronstein R, Mukamel Z, Keren-Shaul H, Jaitin D, Tal L, Shalev-Schlosser G, Harel TH, Tanay A, Eshed Y.
Meir Z, et al. Among authors: ben kiki o.
Nat Plants. 2021 Jun;7(6):800-813. doi: 10.1038/s41477-021-00936-8. Epub 2021 Jun 16.
Nat Plants. 2021.
PMID: 34135484
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Metacell-2: a divide-and-conquer metacell algorithm for scalable scRNA-seq analysis.
Ben-Kiki O, Bercovich A, Lifshitz A, Tanay A.
Ben-Kiki O, et al.
Genome Biol. 2022 Apr 19;23(1):100. doi: 10.1186/s13059-022-02667-1.
Genome Biol. 2022.
PMID: 35440087
Free PMC article.
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DNA methyltransferases 3A and 3B target specific sequences during mouse gastrulation.
Mukamel Z, Lifshitz A, Mittnenzweig M, Chomsky E, Schwartzman O, Ben-Kiki O, Zerbib M, Tanay A.
Mukamel Z, et al. Among authors: ben kiki o.
Nat Struct Mol Biol. 2022 Dec;29(12):1252-1265. doi: 10.1038/s41594-022-00885-6. Epub 2022 Dec 12.
Nat Struct Mol Biol. 2022.
PMID: 36510023
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MCProj: metacell projection for interpretable and quantitative use of transcriptional atlases.
Ben-Kiki O, Bercovich A, Lifshitz A, Raz O, Brook D, Tanay A.
Ben-Kiki O, et al.
Genome Biol. 2023 Oct 5;24(1):220. doi: 10.1186/s13059-023-03069-7.
Genome Biol. 2023.
PMID: 37798781
Free PMC article.
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