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Unheeded SARS-CoV-2 proteins? A deep look into negative-sense RNA.
Bartas M, Volná A, Beaudoin CA, Poulsen ET, Červeň J, Brázda V, Špunda V, Blundell TL, Pečinka P. Bartas M, et al. Among authors: beaudoin ca. Brief Bioinform. 2022 May 13;23(3):bbac045. doi: 10.1093/bib/bbac045. Brief Bioinform. 2022. PMID: 35229157 Free PMC article.
Are There Hidden Genes in DNA/RNA Vaccines?
Beaudoin CA, Bartas M, Volná A, Pečinka P, Blundell TL. Beaudoin CA, et al. Front Immunol. 2022 Feb 8;13:801915. doi: 10.3389/fimmu.2022.801915. eCollection 2022. Front Immunol. 2022. PMID: 35211117 Free PMC article.
SARS-CoV-2 Omicron subvariant spike N405 unlikely to rapidly deamidate.
Beaudoin CA, Petsolari E, Hamaia SW, Hala S, Alofi FS, Pandurangan AP, Blundell TL, Chaitanya Vedithi S, Huang CL, Jackson AP. Beaudoin CA, et al. Biochem Biophys Res Commun. 2023 Jul 23;666:61-67. doi: 10.1016/j.bbrc.2023.04.088. Epub 2023 May 2. Biochem Biophys Res Commun. 2023. PMID: 37178506 Free PMC article.
Producing polished prokaryotic pangenomes with the Panaroo pipeline.
Tonkin-Hill G, MacAlasdair N, Ruis C, Weimann A, Horesh G, Lees JA, Gladstone RA, Lo S, Beaudoin C, Floto RA, Frost SDW, Corander J, Bentley SD, Parkhill J. Tonkin-Hill G, et al. Genome Biol. 2020 Jul 22;21(1):180. doi: 10.1186/s13059-020-02090-4. Genome Biol. 2020. PMID: 32698896 Free PMC article.