Baulin E - Search Results

1

ANANASTRA: annotation and enrichment analysis of allele-specific transcription factor binding at SNPs.

Boytsov A, Abramov S, Aiusheeva AZ, Kasianova AM, Baulin E, Kuznetsov IA, Aulchenko YS, Kolmykov S, Yevshin I, Kolpakov F, Vorontsov IE, Makeev VJ, Kulakovskiy IV. Boytsov A, et al. Among authors: baulin e. Nucleic Acids Res. 2022 Jul 5;50(W1):W51-W56. doi: 10.1093/nar/gkac262. Nucleic Acids Res. 2022. PMID: 35446421 Free PMC article.

2

Landscape of allele-specific transcription factor binding in the human genome.

Abramov S, Boytsov A, Bykova D, Penzar DD, Yevshin I, Kolmykov SK, Fridman MV, Favorov AV, Vorontsov IE, Baulin E, Kolpakov F, Makeev VJ, Kulakovskiy IV. Abramov S, et al. Among authors: baulin e. Nat Commun. 2021 May 12;12(1):2751. doi: 10.1038/s41467-021-23007-0. Nat Commun. 2021. PMID: 33980847 Free PMC article.

3

Brain-related genes are specifically enriched with long phase 1 introns.

Baulin EF, Kulakovskiy IV, Roytberg MA, Astakhova TV. Baulin EF, et al. PLoS One. 2020 May 29;15(5):e0233978. doi: 10.1371/journal.pone.0233978. eCollection 2020. PLoS One. 2020. PMID: 32470086 Free PMC article.

4

Annotation of the local context of the RNA secondary structure improves the classification and prediction of A-minors.

Shalybkova AA, Mikhailova DS, Kulakovskiy IV, Fakhranurova LI, Baulin EF. Shalybkova AA, et al. Among authors: baulin ef. RNA. 2021 May 20;27(8):907-19. doi: 10.1261/rna.078535.120. Online ahead of print. RNA. 2021. PMID: 34016706 Free PMC article.

5

Base-intercalated and base-wedged stacking elements in 3D-structure of RNA and RNA-protein complexes.

Baulin E, Metelev V, Bogdanov A. Baulin E, et al. Nucleic Acids Res. 2020 Sep 4;48(15):8675-8685. doi: 10.1093/nar/gkaa610. Nucleic Acids Res. 2020. PMID: 32687167 Free PMC article.

6

An updated version of NPIDB includes new classifications of DNA-protein complexes and their families.

Zanegina O, Kirsanov D, Baulin E, Karyagina A, Alexeevski A, Spirin S. Zanegina O, et al. Among authors: baulin e. Nucleic Acids Res. 2016 Jan 4;44(D1):D144-53. doi: 10.1093/nar/gkv1339. Epub 2015 Dec 9. Nucleic Acids Res. 2016. PMID: 26656949 Free PMC article.

7

Features and Functions of the A-Minor Motif, the Most Common Motif in RNA Structure.

Baulin EF. Baulin EF. Biochemistry (Mosc). 2021 Aug;86(8):952-961. doi: 10.1134/S000629792108006X. Biochemistry (Mosc). 2021. PMID: 34488572 Free article. Review.

8

URS DataBase: universe of RNA structures and their motifs.

Baulin E, Yacovlev V, Khachko D, Spirin S, Roytberg M. Baulin E, et al. Database (Oxford). 2016 May 30;2016:baw085. doi: 10.1093/database/baw085. Print 2016. Database (Oxford). 2016. PMID: 27242032 Free PMC article.

9

Conserved structures and dynamics in 5'-proximal regions of Betacoronavirus RNA genomes.

de Moura TR, Purta E, Bernat A, Martín-Cuevas EM, Kurkowska M, Baulin EF, Mukherjee S, Nowak J, Biela AP, Rawski M, Glatt S, Moreno-Herrero F, Bujnicki JM. de Moura TR, et al. Among authors: baulin ef. Nucleic Acids Res. 2024 Apr 12;52(6):3419-3432. doi: 10.1093/nar/gkae144. Nucleic Acids Res. 2024. PMID: 38426934 Free PMC article.

10

Multiple Non-Canonical Base-Stacking Interactions as One of the Major Determinants of RNA Tertiary Structure Organization.

Metelev VG, Baulin EF, Bogdanov AA. Metelev VG, et al. Among authors: baulin ef. Biochemistry (Mosc). 2023 Jun;88(6):792-800. doi: 10.1134/S000629792306007X. Biochemistry (Mosc). 2023. PMID: 37748875

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