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DigestPath: A benchmark dataset with challenge review for the pathological detection and segmentation of digestive-system.
Med Image Anal. 2022 Aug;80:102485. doi: 10.1016/j.media.2022.102485. Epub 2022 May 24.
Med Image Anal. 2022.
PMID: 35679692
Consistency regularisation in varying contexts and feature perturbations for semi-supervised semantic segmentation of histology images.
Bashir RMS, Qaiser T, Raza SEA, Rajpoot NM.
Bashir RMS, et al.
Med Image Anal. 2024 Jan;91:102997. doi: 10.1016/j.media.2023.102997. Epub 2023 Oct 11.
Med Image Anal. 2024.
PMID: 37866169
Free article.
Item in Clipboard
TIAToolbox as an end-to-end library for advanced tissue image analytics.
Pocock J, Graham S, Vu QD, Jahanifar M, Deshpande S, Hadjigeorghiou G, Shephard A, Bashir RMS, Bilal M, Lu W, Epstein D, Minhas F, Rajpoot NM, Raza SEA.
Pocock J, et al. Among authors: bashir rms.
Commun Med (Lond). 2022 Sep 24;2:120. doi: 10.1038/s43856-022-00186-5. eCollection 2022.
Commun Med (Lond). 2022.
PMID: 36168445
Free PMC article.
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LYSTO: The Lymphocyte Assessment Hackathon and Benchmark Dataset.
Jiao Y, van der Laak J, Albarqouni S, Li Z, Tan T, Bhalerao A, Cheng S, Ma J, Pocock J, Pluim JPW, Koohbanani NA, Bashir RMS, Raza SEA, Liu S, Graham S, Wetstein S, Khurram SA, Liu X, Rajpoot N, Veta M, Ciompi F.
Jiao Y, et al. Among authors: bashir rms.
IEEE J Biomed Health Inform. 2024 Mar;28(3):1161-1172. doi: 10.1109/JBHI.2023.3327489. Epub 2024 Mar 6.
IEEE J Biomed Health Inform. 2024.
PMID: 37878422
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A digital score of peri-epithelial lymphocytic activity predicts malignant transformation in oral epithelial dysplasia.
Bashir RMS, Shephard AJ, Mahmood H, Azarmehr N, Raza SEA, Khurram SA, Rajpoot NM.
Bashir RMS, et al.
J Pathol. 2023 Aug;260(4):431-442. doi: 10.1002/path.6094. Epub 2023 Jun 9.
J Pathol. 2023.
PMID: 37294162
Free PMC article.
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