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A Deep Learning Approach to Antibiotic Discovery.
Stokes JM, Yang K, Swanson K, Jin W, Cubillos-Ruiz A, Donghia NM, MacNair CR, French S, Carfrae LA, Bloom-Ackermann Z, Tran VM, Chiappino-Pepe A, Badran AH, Andrews IW, Chory EJ, Church GM, Brown ED, Jaakkola TS, Barzilay R, Collins JJ. Stokes JM, et al. Among authors: barzilay r. Cell. 2020 Apr 16;181(2):475-483. doi: 10.1016/j.cell.2020.04.001. Cell. 2020. PMID: 32302574 Free article. No abstract available.
Sybil: A Validated Deep Learning Model to Predict Future Lung Cancer Risk From a Single Low-Dose Chest Computed Tomography.
Mikhael PG, Wohlwend J, Yala A, Karstens L, Xiang J, Takigami AK, Bourgouin PP, Chan P, Mrah S, Amayri W, Juan YH, Yang CT, Wan YL, Lin G, Sequist LV, Fintelmann FJ, Barzilay R. Mikhael PG, et al. Among authors: barzilay r. J Clin Oncol. 2023 Apr 20;41(12):2191-2200. doi: 10.1200/JCO.22.01345. Epub 2023 Jan 12. J Clin Oncol. 2023. PMID: 36634294 Free PMC article.
Prediction of Organic Reaction Outcomes Using Machine Learning.
Coley CW, Barzilay R, Jaakkola TS, Green WH, Jensen KF. Coley CW, et al. Among authors: barzilay r. ACS Cent Sci. 2017 May 24;3(5):434-443. doi: 10.1021/acscentsci.7b00064. Epub 2017 Apr 18. ACS Cent Sci. 2017. PMID: 28573205 Free PMC article.
A Deep Learning Approach to Antibiotic Discovery.
Stokes JM, Yang K, Swanson K, Jin W, Cubillos-Ruiz A, Donghia NM, MacNair CR, French S, Carfrae LA, Bloom-Ackermann Z, Tran VM, Chiappino-Pepe A, Badran AH, Andrews IW, Chory EJ, Church GM, Brown ED, Jaakkola TS, Barzilay R, Collins JJ. Stokes JM, et al. Among authors: barzilay r. Cell. 2020 Feb 20;180(4):688-702.e13. doi: 10.1016/j.cell.2020.01.021. Cell. 2020. PMID: 32084340 Free PMC article.
Deep learning identifies synergistic drug combinations for treating COVID-19.
Jin W, Stokes JM, Eastman RT, Itkin Z, Zakharov AV, Collins JJ, Jaakkola TS, Barzilay R. Jin W, et al. Among authors: barzilay r. Proc Natl Acad Sci U S A. 2021 Sep 28;118(39):e2105070118. doi: 10.1073/pnas.2105070118. Proc Natl Acad Sci U S A. 2021. PMID: 34526388 Free PMC article.
[No title available]
[No authors listed] [No authors listed] PMID: 36782655
Deep learning-guided discovery of an antibiotic targeting Acinetobacter baumannii.
Liu G, Catacutan DB, Rathod K, Swanson K, Jin W, Mohammed JC, Chiappino-Pepe A, Syed SA, Fragis M, Rachwalski K, Magolan J, Surette MG, Coombes BK, Jaakkola T, Barzilay R, Collins JJ, Stokes JM. Liu G, et al. Among authors: barzilay r. Nat Chem Biol. 2023 Nov;19(11):1342-1350. doi: 10.1038/s41589-023-01349-8. Epub 2023 May 25. Nat Chem Biol. 2023. PMID: 37231267
168 results