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Effects of phenolic monomers on growth of Acidothermus cellulolyticus.
Joh LD, Rezaei F, Barabote RD, Parales JV, Parales RE, Berry AM, Vandergheynst JS. Joh LD, et al. Among authors: barabote rd. Biotechnol Prog. 2011 Jan-Feb;27(1):23-31. doi: 10.1002/btpr.525. Epub 2010 Dec 22. Biotechnol Prog. 2011. PMID: 21312351
Complete genome of the cellulolytic thermophile Acidothermus cellulolyticus 11B provides insights into its ecophysiological and evolutionary adaptations.
Barabote RD, Xie G, Leu DH, Normand P, Necsulea A, Daubin V, Médigue C, Adney WS, Xu XC, Lapidus A, Parales RE, Detter C, Pujic P, Bruce D, Lavire C, Challacombe JF, Brettin TS, Berry AM. Barabote RD, et al. Genome Res. 2009 Jun;19(6):1033-43. doi: 10.1101/gr.084848.108. Epub 2009 Mar 6. Genome Res. 2009. PMID: 19270083 Free PMC article.
Xenobiotic efflux in bacteria and fungi: a genomics update.
Barabote RD, Thekkiniath J, Strauss RE, Vediyappan G, Fralick JA, San Francisco MJ. Barabote RD, et al. Adv Enzymol Relat Areas Mol Biol. 2011;77:237-306. doi: 10.1002/9780470920541.ch6. Adv Enzymol Relat Areas Mol Biol. 2011. PMID: 21692371 Free PMC article. Review. No abstract available.
Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina).
Martinez D, Berka RM, Henrissat B, Saloheimo M, Arvas M, Baker SE, Chapman J, Chertkov O, Coutinho PM, Cullen D, Danchin EG, Grigoriev IV, Harris P, Jackson M, Kubicek CP, Han CS, Ho I, Larrondo LF, de Leon AL, Magnuson JK, Merino S, Misra M, Nelson B, Putnam N, Robbertse B, Salamov AA, Schmoll M, Terry A, Thayer N, Westerholm-Parvinen A, Schoch CL, Yao J, Barabote R, Nelson MA, Detter C, Bruce D, Kuske CR, Xie G, Richardson P, Rokhsar DS, Lucas SM, Rubin EM, Dunn-Coleman N, Ward M, Brettin TS. Martinez D, et al. Among authors: barabote r. Nat Biotechnol. 2008 May;26(5):553-60. doi: 10.1038/nbt1403. Epub 2008 May 4. Nat Biotechnol. 2008. PMID: 18454138
Complete genome sequence of Arthrobacter sp. strain FB24.
Nakatsu CH, Barabote R, Thompson S, Bruce D, Detter C, Brettin T, Han C, Beasley F, Chen W, Konopka A, Xie G. Nakatsu CH, et al. Among authors: barabote r. Stand Genomic Sci. 2013 Sep 30;9(1):106-16. doi: 10.4056/sigs.4438185. eCollection 2013 Oct 16. Stand Genomic Sci. 2013. PMID: 24501649 Free PMC article.
Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.
Ward NL, Challacombe JF, Janssen PH, Henrissat B, Coutinho PM, Wu M, Xie G, Haft DH, Sait M, Badger J, Barabote RD, Bradley B, Brettin TS, Brinkac LM, Bruce D, Creasy T, Daugherty SC, Davidsen TM, DeBoy RT, Detter JC, Dodson RJ, Durkin AS, Ganapathy A, Gwinn-Giglio M, Han CS, Khouri H, Kiss H, Kothari SP, Madupu R, Nelson KE, Nelson WC, Paulsen I, Penn K, Ren Q, Rosovitz MJ, Selengut JD, Shrivastava S, Sullivan SA, Tapia R, Thompson LS, Watkins KL, Yang Q, Yu C, Zafar N, Zhou L, Kuske CR. Ward NL, et al. Among authors: barabote rd. Appl Environ Microbiol. 2009 Apr;75(7):2046-56. doi: 10.1128/AEM.02294-08. Epub 2009 Feb 5. Appl Environ Microbiol. 2009. PMID: 19201974 Free PMC article.
33 results