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Unraveling the functional dark matter through global metagenomics.
Pavlopoulos GA, Baltoumas FA, Liu S, Selvitopi O, Camargo AP, Nayfach S, Azad A, Roux S, Call L, Ivanova NN, Chen IM, Paez-Espino D, Karatzas E; Novel Metagenome Protein Families Consortium; Iliopoulos I, Konstantinidis K, Tiedje JM, Pett-Ridge J, Baker D, Visel A, Ouzounis CA, Ovchinnikov S, Buluç A, Kyrpides NC. Pavlopoulos GA, et al. Among authors: baltoumas fa. Nature. 2023 Oct;622(7983):594-602. doi: 10.1038/s41586-023-06583-7. Epub 2023 Oct 11. Nature. 2023. PMID: 37821698 Free PMC article.
Arena3Dweb: interactive 3D visualization of multilayered networks.
Karatzas E, Baltoumas FA, Panayiotou NA, Schneider R, Pavlopoulos GA. Karatzas E, et al. Among authors: baltoumas fa. Nucleic Acids Res. 2021 Jul 2;49(W1):W36-W45. doi: 10.1093/nar/gkab278. Nucleic Acids Res. 2021. PMID: 33885790 Free PMC article.
VICTOR: A visual analytics web application for comparing cluster sets.
Karatzas E, Gkonta M, Hotova J, Baltoumas FA, Kontou PI, Bobotsis CJ, Bagos PG, Pavlopoulos GA. Karatzas E, et al. Among authors: baltoumas fa. Comput Biol Med. 2021 Aug;135:104557. doi: 10.1016/j.compbiomed.2021.104557. Epub 2021 Jun 8. Comput Biol Med. 2021. PMID: 34139436
OnTheFly2.0: a text-mining web application for automated biomedical entity recognition, document annotation, network and functional enrichment analysis.
Baltoumas FA, Zafeiropoulou S, Karatzas E, Paragkamian S, Thanati F, Iliopoulos I, Eliopoulos AG, Schneider R, Jensen LJ, Pafilis E, Pavlopoulos GA. Baltoumas FA, et al. NAR Genom Bioinform. 2021 Oct 6;3(4):lqab090. doi: 10.1093/nargab/lqab090. eCollection 2021 Dec. NAR Genom Bioinform. 2021. PMID: 34632381 Free PMC article.
Arena3Dweb: interactive 3D visualization of multilayered networks supporting multiple directional information channels, clustering analysis and application integration.
Kokoli M, Karatzas E, Baltoumas FA, Schneider R, Pafilis E, Paragkamian S, Doncheva NT, Jensen LJ, Pavlopoulos GA. Kokoli M, et al. Among authors: baltoumas fa. NAR Genom Bioinform. 2023 May 30;5(2):lqad053. doi: 10.1093/nargab/lqad053. eCollection 2023 Jun. NAR Genom Bioinform. 2023. PMID: 37260509 Free PMC article.
27 results